RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 PEX11BO96011 259 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 IGLV3-25P01717 112 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ALPLP05186 524 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SLC10A3P09131 477 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 GADD45AP24522 165 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 EPHA2P29317 976 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ANXA11P50995 505 aaKnown RBP13.19□□□□□ -0.3
NCLN-201ENST00000246117 HYAL2Q12891 473 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 IL18Q14116 193 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 TEAD4Q15561 434 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 LIPKQ5VXJ0 399 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 CYP4Z2PQ8N1L4 340 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ZNF671Q8TAW3 534 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 DPF3Q92784 378 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 GLYATL1Q969I3 302 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 NUS1Q96E22 293 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SERHL2Q9H4I8 314 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SERHLQ9NQF3 203 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 TRPS1Q9UHF7 1281 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 GSTK1Q9Y2Q3 226 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 QSOX1O00391 747 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SLC22A1O15245 554 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 FGBP02675 491 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 RPN2P04844 631 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
NCLN-201ENST00000246117 CRHBPP24387 322 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 RXRGP48443 463 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ZNF404Q494X3 552 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 PRSS58Q8IYP2 241 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 TEX26Q8N6G2 289 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 FAIM2Q9BWQ8 316 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SLC46A2Q9BY10 475 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 GPR52Q9Y2T5 361 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
NCLN-201ENST00000246117 CENPXA8MT69 81 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 VIPR1P32241 457 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 MASP1P48740 699 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 XKP51811 444 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■□□□ 13
NCLN-201ENST00000246117 HEPACAMQ14CZ8 416 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 OOSP2Q86WS3 158 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 DPP10Q8N608 796 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 ZNF296Q8WUU4 475 aaPredicted RBP13.19□□□□□ -0.3
NCLN-201ENST00000246117 LMLNQ96KR4 655 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 QRFPRQ96P65 431 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SPRTNQ9H040 489 aaPredicted RBP13.19□□□□□ -0.3
NCLN-201ENST00000246117 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
NCLN-201ENST00000246117 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 TAPBPO15533 448 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 PI15O43692 258 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ADH1CP00326 375 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 PRNPP04156 253 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 CXCR2P25025 360 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 HTR1BP28222 390 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 HOXC13P31276 330 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 HOXC5Q00444 222 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 GPR68Q15743 365 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ATG9BQ674R7 924 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 VITQ6UXI7 678 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 COMMD6Q7Z4G1 85 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 OR51E2Q9H255 320 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 DPP7Q9UHL4 492 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ZW10O43264 779 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 RHOP08100 348 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 TIE1P35590 1138 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 NKX3-2P78367 333 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ZNF763Q0D2J5 394 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.18□□□□□ -0.3
NCLN-201ENST00000246117 MFSD2AQ8NA29 543 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 DCAF13Q9NV06 445 aaKnown RBP13.18□□□□□ -0.3
NCLN-201ENST00000246117 GIN1Q9NXP7 522 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 TUBA8Q9NY65 449 aaPredicted RBP13.18□□□□□ -0.3
NCLN-201ENST00000246117 OR1A2Q9Y585 309 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 LOXHD1Q8IVV2 1947 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 OR12D1P0DN82 309 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 PRG2P13727 222 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 BMP7P18075 431 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
NCLN-201ENST00000246117 LHFPL3Q86UP9 236 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 CADM2Q8N3J6 435 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
NCLN-201ENST00000246117 WDR48Q8TAF3 677 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ZNF675Q8TD23 568 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 DNASE1L2Q92874 299 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 TMED9Q9BVK6 235 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 FZD3Q9NPG1 666 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 ZNF510Q9Y2H8 683 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 SPTBP11277 2137 aa13.18□□□□□ -0.3
NCLN-201ENST00000246117 FUOMA2VDF0 154 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 LRRC72A6NJI9 287 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
NCLN-201ENST00000246117 ACOX3O15254 700 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms