RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MTBPQ96DY7 904 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 PHF21BQ96EK2 531 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 IMMP1LQ96LU5 166 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 F2RL3Q96RI0 385 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 MS4A8Q9BY19 250 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 SLC25A18Q9H1K4 315 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF552Q9H707 407 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 MKKSQ9NPJ1 570 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 KCMF1Q9P0J7 381 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-201ENST00000230480 OPTCQ9UBM4 332 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 C3orf18Q9UK00 162 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 PADI2Q9Y2J8 665 aa12.96□□□□□ -0.33
VEGFA-201ENST00000230480 CPAMD8Q8IZJ3 1885 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 SYCE1LA8MT33 242 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 STX16-NPEPL1H3BU86 382 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 STX16O14662 325 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 SLC35G6P0C7Q6 338 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 COX6A1P12074 109 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 CREB1P16220 341 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 CD97P48960 835 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 BTG2P78543 158 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 IRF8Q02556 426 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 GTF2H2Q13888 395 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 PCOLCEQ15113 449 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 NDUFA9Q16795 377 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 TSNAXIP1Q2TAA8 658 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 GRHL2Q6ISB3 625 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 TCTN3Q6NUS6 607 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 GTF2H2CQ6P1K8 395 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 ABHD17CQ6PCB6 329 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 ATG14Q6ZNE5 492 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 CA13Q8N1Q1 262 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 MREGQ8N565 214 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 TMEM102Q8N9M5 508 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-201ENST00000230480 ACMSDQ8TDX5 336 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 TSLPQ969D9 159 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 NACC2Q96BF6 587 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 CDK15Q96Q40 435 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 CRB3Q9BUF7 120 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 EFCAB11Q9BUY7 163 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 CAPS2Q9BXY5 557 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-201ENST00000230480 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 MRPL46Q9H2W6 279 aaKnown RBP12.95□□□□□ -0.34
VEGFA-201ENST00000230480 YY1AP1Q9H869 796 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 IPPKQ9H8X2 491 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 ANKHQ9HCJ1 492 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 SEMA3GQ9NS98 782 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 FBXL4Q9UKA2 621 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 NXT1Q9UKK6 140 aaKnown RBP12.95□□□□□ -0.34
VEGFA-201ENST00000230480 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 IKBKGQ9Y6K9 419 aa12.95□□□□□ -0.34
VEGFA-201ENST00000230480 RP1L1Q8IWN7 2480 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-201ENST00000230480 FLNCQ14315 2725 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 IGKV3D-11A0A0A0MRZ8 115 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 IGHV3-20A0A0C4DH32 117 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
VEGFA-201ENST00000230480 RTCAO00442 366 aaKnown RBP12.94□□□□□ -0.34
VEGFA-201ENST00000230480 CLGNO14967 610 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 H2AFYO75367 372 aaKnown RBP12.94□□□□□ -0.34
VEGFA-201ENST00000230480 PROCP04070 461 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 SERPIND1P05546 499 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 CD63P08962 238 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 GFAPP14136 432 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 EPB42P16452 691 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 TSPAN8P19075 237 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 XCR1P46094 333 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 AVPR1BP47901 424 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 PIK3CGP48736 1102 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 NEK2P51955 445 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 EMP2P54851 167 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 CDH13P55290 713 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 OCA2Q04671 838 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 FAAH2Q6GMR7 532 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 RAB43Q86YS6 212 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 PLPP5Q8NEB5 264 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 TMEM237Q96Q45 408 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 NTMT1Q9BV86 223 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 SORBS1Q9BX66 1292 aaKnown RBP12.94□□□□□ -0.34
VEGFA-201ENST00000230480 RBCK1Q9BYM8 510 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 NOL11Q9H8H0 719 aaKnown RBP12.94□□□□□ -0.34
VEGFA-201ENST00000230480 PCDHGA9Q9Y5G4 932 aaKnown RBP12.94□□□□□ -0.34
VEGFA-201ENST00000230480 TENM4Q6N022 2769 aa12.94□□□□□ -0.34
VEGFA-201ENST00000230480 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 IQANK1A0A1B0GTG1 560 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 A6NL46 340 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 SMIM23A6NLE4 172 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 H0YIV9 168 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 CYR61O00622 381 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 SH3BGRLO75368 114 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 S100BP04271 92 aaPredicted RBP12.93□□□□□ -0.34
VEGFA-201ENST00000230480 CXCR2P25025 360 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 BTN3A2P78410 334 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 NFATC3Q12968 1075 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 HERC3Q15034 1050 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 ZNF678Q5SXM1 525 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 DEPDC1Q5TB30 811 aa12.93□□□□□ -0.34
VEGFA-201ENST00000230480 LGSNQ5TDP6 509 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms