RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 LILRA3Q8N6C8 439 aaPredicted RBP11.91□□□□□ -0.5
NUP88-201ENST00000225696 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 DENND6BQ8NEG7 585 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 OR4A15Q8NGL6 344 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 OR5AK3PQ8NH89 298 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 WDR36Q8NI36 951 aaKnown RBP11.91□□□□□ -0.5
NUP88-201ENST00000225696 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 CIDECQ96AQ7 238 aaPredicted RBP11.91□□□□□ -0.5
NUP88-201ENST00000225696 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 TRNT1Q96Q11 434 aaKnown RBP11.91□□□□□ -0.5
NUP88-201ENST00000225696 OR4K3Q96R72 315 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 TAPBPLQ9BX59 468 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 RSPO3Q9BXY4 272 aaPredicted RBP11.91□□□□□ -0.5
NUP88-201ENST00000225696 MMP28Q9H239 520 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 HHATLQ9HCP6 504 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 TBC1D14Q9P2M4 693 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 POFUT2Q9Y2G5 429 aa11.91□□□□□ -0.5
NUP88-201ENST00000225696 GFYI3L273 518 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 ADAMDEC1O15204 470 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 CAPN5O15484 640 aaPredicted RBP11.9□□□□□ -0.5
NUP88-201ENST00000225696 GREM1O60565 184 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 RECKO95980 971 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 APOA1P02647 267 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 CBSLP0DN79 551 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 CNR2P34972 360 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 CBSP35520 551 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 DEFA1P59665 94 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 DEFA3P59666 94 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 SMAD3P84022 425 aaKnown RBP11.9□□□□□ -0.5
NUP88-201ENST00000225696 PRSS53Q2L4Q9 553 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 Q5BKY6 102 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.9□□□□□ -0.5
NUP88-201ENST00000225696 OTOP2Q7RTS6 562 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 BEX2Q9BXY8 128 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 EXOSC4Q9NPD3 245 aaKnown RBP11.9□□□□□ -0.5
NUP88-201ENST00000225696 TIGARQ9NQ88 270 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 TAS2R9Q9NYW1 312 aa11.9□□□□□ -0.5
NUP88-201ENST00000225696 ZNF106Q9H2Y7 1883 aaKnown RBP11.9□□□□□ -0.5
NUP88-201ENST00000225696 HELZP42694 1942 aaKnown RBP11.9□□□□□ -0.51
NUP88-201ENST00000225696 TET1Q8NFU7 2136 aa11.9□□□□□ -0.51
NUP88-201ENST00000225696 TNFRSF21O75509 655 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 FHP07954 510 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CHMP24386 653 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 SOX6P35712 828 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 FAM214AQ32MH5 1076 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 IER5LQ5T953 404 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 AQP11Q8NBQ7 271 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 MED8Q96G25 268 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CEP19Q96LK0 163 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CDCA4Q9BXL8 241 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 ASPNQ9BXN1 380 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 OR2B2Q9GZK3 357 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 SMURF1Q9HCE7 757 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 TRPM5Q9NZQ8 1165 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CCRL2O00421 344 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 SAP18O00422 153 aaKnown RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 SEPT4O43236 478 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 LRRTM2O43300 516 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 PRMT3O60678 531 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 ENTPD6O75354 484 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 C6orf47O95873 294 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 C8GP07360 202 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CHRM5P08912 532 aaPredicted RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 SRCP12931 536 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 ANXA8P13928 327 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 HNMTP50135 292 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CAP1Q01518 475 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CSTF3Q12996 717 aaKnown RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 STARD3Q14849 445 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 EIF4HQ15056 248 aaKnown RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 IFI44LQ53G44 452 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 CDKL4Q5MAI5 379 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 ZNF544Q6NX49 715 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 PTCHD4Q6ZW05 846 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 ZNF367Q7RTV3 350 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 TMEM150AQ86TG1 271 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 THOC6Q86W42 341 aaKnown RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 UBE2J2Q8N2K1 259 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 DCAF4L2Q8NA75 395 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 SCAMP4Q969E2 229 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 ASIC4Q96FT7 647 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 FYTTD1Q96QD9 318 aaKnown RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 PRM3Q9NNZ6 103 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 C11orf16Q9NQ32 467 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 SNTG1Q9NSN8 517 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 FTSJ1Q9UET6 329 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 BTNL2Q9UIR0 455 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 RUVBL1Q9Y265 456 aaKnown RBP11.89□□□□□ -0.51
NUP88-201ENST00000225696 CFL2Q9Y281 166 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 MAP4K5Q9Y4K4 846 aa11.89□□□□□ -0.51
NUP88-201ENST00000225696 PNMA8CA0A1B0GUJ8 204 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 GNG14A0A1W2PPG7 69 aa11.88□□□□□ -0.51
NUP88-201ENST00000225696 A0A1W2PQ09 198 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms