RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 TSSK3Q96PN8 268 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 DEPDC7Q96QD5 511 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 MAPKAP1Q9BPZ7 522 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 APOL5Q9BWW9 433 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 GPR63Q9BZJ6 419 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 SMURF1Q9HCE7 757 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 TBC1D24Q9ULP9 559 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 PCDHGC4Q9Y5F7 938 aa15.33■□□□□ 0.04
SF3A2-201ENST00000221494 TNFRSF11BO00300 401 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 NRG2O14511 850 aaPredicted RBP15.32■□□□□ 0.04
SF3A2-201ENST00000221494 KIAA0513O60268 411 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 UGDHO60701 494 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 SCN2BO60939 215 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 ZXDBP98169 803 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 LRRC66Q68CR7 880 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 GPR153Q6NV75 609 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 CAMKMTQ7Z624 323 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 NLGN4XQ8N0W4 816 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 ARL14EPQ8N8R7 260 aaPredicted RBP15.32■□□□□ 0.04
SF3A2-201ENST00000221494 OR10G2Q8NGC3 310 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 OR10Q1Q8NGQ4 319 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 CHCHD6Q9BRQ6 235 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 CENPOQ9BU64 300 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 TRAF4Q9BUZ4 470 aaPredicted RBP15.32■□□□□ 0.04
SF3A2-201ENST00000221494 TAPBPLQ9BX59 468 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 TMEM245Q9H330 911 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 THSD1Q9NS62 852 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 ZNF226Q9NYT6 803 aa15.32■□□□□ 0.04
SF3A2-201ENST00000221494 ZFP37Q9Y6Q3 630 aaPredicted RBP15.32■□□□□ 0.04
SF3A2-201ENST00000221494 LAMA3Q16787 3333 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 A0A1B0GVM2 712 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 GREM1O60565 184 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 DIRAS1O95057 198 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 PTHP01270 115 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 YES1P07947 543 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 STSP08842 583 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 EPORP19235 508 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ACRV1P26436 265 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 RRM2P31350 389 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 GDF5P43026 501 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 WNT3P56703 355 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 GNG2P59768 71 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 RHAGQ02094 409 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ST3GAL4Q11206 333 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ZNF177Q13360 481 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 PDE12Q6L8Q7 609 aaKnown RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 NOXRED1Q6NXP6 359 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ATCAYQ86WG3 371 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 GALNT12Q8IXK2 581 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CYP4Z2PQ8N1L4 340 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CFAP52Q8N1V2 620 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 FAM181AQ8N9Y4 354 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ADAMTS19Q8TE59 1207 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 TTC9Q92623 222 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 RIPOR3Q96MK2 946 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 Q96MT0 163 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 KCNC2Q96PR1 638 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 GDF15Q99988 308 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 SYNDIG1Q9H7V2 258 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 DDX28Q9NUL7 540 aaKnown RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 TBC1D14Q9P2M4 693 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CCL16O15467 120 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 SEC14L5O43304 696 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 GUCY1B2O75343 617 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 TRIM3O75382 744 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 MFN2O95140 757 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 PRAMEF1O95521 474 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 C8GP07360 202 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 IRF1P10914 325 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 AP1S1P61966 158 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 SMAD3P84022 425 aaKnown RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CYP4F8P98187 520 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 NFATC2Q13469 925 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CPSF6Q16630 551 aaKnown RBP eCLIP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ADGRF1Q5T601 910 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 RNLSQ5VYX0 342 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 FAM92BQ6ZTR7 304 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 RTL10Q7L3V2 364 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 LIX1LQ8IVB5 337 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 SLC44A2Q8IWA5 706 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CBARPQ8N350 705 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 C11orf65Q8NCR3 313 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 ANGPTL6Q8NI99 470 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 MRPS31Q92665 395 aaKnown RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CLIP3Q96DZ5 547 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 EXOC2Q96KP1 924 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 FEVQ99581 238 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 MGLLQ99685 303 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 IMPAD1Q9NX62 359 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 STOML2Q9UJZ1 356 aa15.31■□□□□ 0.04
SF3A2-201ENST00000221494 CAB39Q9Y376 341 aaPredicted RBP15.31■□□□□ 0.04
SF3A2-201ENST00000221494 IQCMA0A1B0GVH7 501 aa15.3■□□□□ 0.04
SF3A2-201ENST00000221494 GAPDHSO14556 408 aaPredicted RBP15.3■□□□□ 0.04
SF3A2-201ENST00000221494 SEMA3DO95025 777 aa15.3■□□□□ 0.04
SF3A2-201ENST00000221494 VIPP01282 170 aa15.3■□□□□ 0.04
SF3A2-201ENST00000221494 HSD3B1P14060 373 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms