RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 NPIPA5E9PKD4 350 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 RNF13O43567 381 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 DLDP09622 509 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 S100A1P23297 94 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 VSX2P58304 361 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SSX6Q7RTT6 188 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 PAQR7Q86WK9 346 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 OR2AP1Q8NGE2 309 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 NTPCRQ9BSD7 190 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 UPB1Q9UBR1 384 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 NPIPA1Q9UND3 350 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 RTCAO00442 366 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 GSTT2BP0CG30 244 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 EXOC3L2Q2M3D2 409 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 Q6ZVL8 140 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 INO80EQ8NBZ0 244 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SUSD3Q96L08 255 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 TMEM59LQ9UK28 342 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 UBR1Q8IWV7 1749 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC22A1O15245 554 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 RFPL1O75677 317 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 TUBG1P23258 451 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SMSP52788 366 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 ARHGAP40Q5TG30 622 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SLITRK4Q8IW52 837 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 C2CD4AQ8NCU7 369 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 DCCP43146 1447 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 M0R129 80 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 LEFTY2O00292 366 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 COCHO43405 550 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 KDELR3O43731 214 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 ITIH1P19827 911 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 CBLBQ13191 982 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 NKAPLQ5M9Q1 402 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 SLC5A11Q8WWX8 675 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 TMEM80Q96HE8 168 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 ZNF700Q9H0M5 742 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 AASSQ9UDR5 926 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 GABRQQ9UN88 632 aa13.15□□□□□ -0.3
TGFBR3-201ENST00000212355 TNFP01375 233 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 SPARCP09486 303 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF12P17014 697 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 RGS19P49795 217 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 OR2L2Q8NH16 312 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 CMTM7Q96FZ5 175 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 MYH15Q9Y2K3 1946 aa13.15□□□□□ -0.31
TGFBR3-201ENST00000212355 L7N2F9 121 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 CHP2O43745 196 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 LEFTY1O75610 366 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 MAGEA2P43356 314 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 VAMP2P63027 116 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ADAM15Q13444 863 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 SGCDQ92629 289 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 KIF1AQ12756 1690 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 PRLP01236 227 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 LY6G5CQ5SRR4 150 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 MSANTD1Q6ZTZ1 278 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 PLA2G15Q8NCC3 412 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 MATN2O00339 956 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 TSPAN6O43657 245 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 IL33O95760 270 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 PAK4O96013 591 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 RPS3P23396 243 aaKnown RBP eCLIP13.14□□□□□ -0.312e-8■■■□□ 17.3
TGFBR3-201ENST00000212355 HTR7P34969 479 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 SLC15A1P46059 708 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 CAPZA1P52907 286 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 WNT7BP56706 349 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 OCLNQ16625 522 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 CCDC58Q4VC31 144 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 RPS26P11Q5JNZ5 115 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 C22orf42Q6IC83 251 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ERMP1Q7Z2K6 904 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 NLGN3Q9NZ94 848 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 GRHPRQ9UBQ7 328 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 B4GALT6Q9UBX8 382 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 AQP12BA6NM10 295 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 SOX1O00570 391 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 CD2P06729 351 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ANXA8P13928 327 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 MAP4K2Q12851 820 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 OR4D1Q15615 310 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 IGFN1Q86VF2 1251 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 AQP12AQ8IXF9 295 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 WDTC1Q8N5D0 677 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 OR6N2Q8NGY6 317 aa13.14□□□□□ -0.31
TGFBR3-201ENST00000212355 ZNF675Q8TD23 568 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms