RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SERPIND1P05546 499 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 UGT2B7P16662 529 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HOXB9P17482 250 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 AHRP35869 848 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CDKN2CP42773 168 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CSNK1EP49674 416 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TAS2R50P59544 299 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PDK3Q15120 406 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TMEM132CQ8N3T6 1108 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DUS3LQ96G46 650 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DUSP26Q9BV47 211 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 AICDAQ9GZX7 198 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FAM120CQ9NX05 1096 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 EGFL7Q9UHF1 273 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 AP1M2Q9Y6Q5 423 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TNRC6BQ9UPQ9 1833 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TTC28Q96AY4 2481 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 A0A096LPI6 279 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GSAPA4D1B5 854 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 LRIT2A6NDA9 550 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TXNDC9O14530 226 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MC1RQ01726 317 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 BNIP2Q12982 314 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CPTPQ5TA50 214 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 UGT2A3Q6UWM9 527 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TRIM73Q86UV7 250 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PAQR7Q86WK9 346 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZNF761Q86XN6 746 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 COQ8BQ96D53 544 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 REEP4Q9H6H4 257 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ACTR10Q9NZ32 417 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ERVK-11Q9UQG0 969 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PCDH15Q96QU1 1955 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ASXL3Q9C0F0 2248 aa18.78■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FAM221BA6H8Z2 402 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 RFXANKO14593 260 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GSNP06396 782 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MAGP20916 626 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GSTM2P28161 218 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HOXA6P31267 233 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SIGLEC14Q08ET2 396 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HYAL2Q12891 473 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZIC1Q15915 447 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CCNYL2Q5T2Q4 361 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FAM71E1Q6IPT2 247 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TMEM26Q6ZUK4 368 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 UBE3DQ7Z6J8 389 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DHFR2Q86XF0 187 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CATSPER1Q8NEC5 780 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 LMX1AQ8TE12 382 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KCTD14Q9BQ13 255 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CENPKQ9BS16 269 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 YIPF3Q9GZM5 350 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 USP22Q9UPT9 525 aa18.77■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CCDC163A0A0D9SF12 145 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PPM1DO15297 605 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 STATHP02808 62 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FURINP09958 794 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CYP4F3Q08477 520 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RUNDC3AQ59EK9 446 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PAGE2Q7Z2X7 111 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PTRH1Q86Y79 214 aaKnown RBP18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TBC1D19Q8N5T2 526 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 LRTOMTQ8WZ04 291 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 NELL1Q92832 810 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 RGMAQ96B86 450 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 AURKBQ96GD4 344 aaPredicted RBP18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PRPF18Q99633 342 aaKnown RBP18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MACROD1Q9BQ69 325 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PIF1Q9H611 641 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SH3BP4Q9P0V3 963 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ATP6V1HQ9UI12 483 aa18.77■□□□□ 0.59
TNFRSF1A-201ENST00000162749 OR2A25A4D2G3 310 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 VILLO15195 856 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 BCAT2O15382 392 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CAPN5O15484 640 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 IL3P08700 152 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ATP6V1B2P21281 511 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 AFF3P51826 1226 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PDE7AQ13946 482 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FXNQ16595 210 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ADPRMQ3LIE5 342 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZNF385BQ569K4 471 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 NUDT13Q86X67 352 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 GKN2Q86XP6 184 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 CLECL1Q8IZS7 167 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 MARVELD2Q8N4S9 558 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ZNF548Q8NEK5 533 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 TRPV3Q8NET8 790 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 NECAB3Q96P71 396 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 FCRL4Q96PJ5 515 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PANX1Q96RD7 426 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SEMA6AQ9H2E6 1030 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 HRASLS2Q9NWW9 162 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 UBAP1Q9NZ09 502 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ACTR3BQ9P1U1 418 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 ENTPD2Q9Y5L3 495 aa18.76■□□□□ 0.59
TNFRSF1A-201ENST00000162749 SPTBP11277 2137 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms