RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tmem259Q8CIV2 574 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Asb17Q8VHP9 295 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Trhr2Q9ERT2 382 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmeff2Q9QYM9 374 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Htatip2Q9Z2G9 242 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm13088A2AGW6 460 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn2r4K7N784 913 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pld3O35405 488 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mybpc3O70468 1270 aaKnown RBP10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 AboP38649 332 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Entpd1P55772 510 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Dnajc11Q5U458 559 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tlx2Q61663 284 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Serpina3aQ6P4P1 422 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olig3Q6PFG8 273 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Otub1Q7TQI3 271 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sh3glb2Q8R3V5 400 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Smg9Q9DB90 520 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Trpc5Q9QX29 975 aa10.95□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Dock2Q8C3J5 1828 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc9a5B2RXE2 898 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc32a1O35633 525 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cpxcr1Q3V0P1 322 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc10a7Q5PT53 340 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mon1bQ8BMQ8 553 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 PigzQ8BTP0 560 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 H2afy2Q8CCK0 372 aaKnown RBP10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Timd2Q8R183 305 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1208Q8VG47 308 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pbdc1Q9D0B6 198 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Eef1e1Q9D1M4 174 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ttc3O88196 1979 aaKnown RBP10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 CntrlA2AL36 2334 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Kctd14A0A0U1RNG7 287 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lrr1D3YY91 422 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Atp6ap1lD3Z5W0 336 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Gm8180E9PXN0 145 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 CkbQ04447 381 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Q3UY34 256 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Xkr4Q5GH67 647 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pea15Q62048 130 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Bhlhb9Q6PB60 539 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr503Q7TRU8 323 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zbtb46Q8BID6 600 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Tmem214Q8BM55 687 aaKnown RBP10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cox4i2Q91W29 172 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 MlycdQ99J39 492 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 NepnQ9CQ76 512 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slc25a46Q9CQS4 418 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 SrrQ9QZX7 339 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rpl7a-ps3A0A140T8L1 270 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 C6E9Q6D8 931 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn2r95L7N274 845 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Cyp1a1P00184 524 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rc3h2P0C090 1187 aaKnown RBP10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 StsP50427 624 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rad51Q08297 339 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Znf865Q3U3I9 1058 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ankrd28Q505D1 1053 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 ClpbQ60649 677 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 CilpQ66K08 1184 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Slain1Q68FF7 579 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Serpina3fQ80X76 445 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Galnt12Q8BGT9 576 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fam210aQ8BGY7 273 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ift80Q8K057 777 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 L2hgdhQ91YP0 464 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Isoc2bQ9DCC7 210 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 SvilQ8K4L3 2170 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Pde4dipQ80YT7 2224 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ttc23lA6H6E9 458 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vmn2r106E9PY92 862 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Acbd4E9Q289 327 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Prf1P10820 554 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ctla2bP12400 113 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Man2a1P27046 1150 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rps26P62855 115 aaKnown RBP10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mmp11Q02853 492 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nell1Q2VWQ2 810 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Aldh16a1Q571I9 802 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 AY358078Q6UY53 465 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1152Q7TR34 310 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Olfr1101Q7TR59 310 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zfp184Q7TSH9 737 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Lcmt2Q8BYR1 686 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Nudt6Q8CH40 313 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Sirt3Q8R104 334 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mrgprb4Q91ZC0 321 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Mettl15Q9DCL4 406 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Vps29Q9QZ88 182 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Ca5bQ9QZA0 317 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Fbxo8Q9QZN3 319 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Atp6ap1Q9R1Q9 463 aa10.94□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Phrf1A6H619 1682 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Aadacl2B2RWD2 401 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Zfp607bG3X9H3 648 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Stc1O55183 247 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Rps7P62082 194 aaKnown RBP10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Smpd1Q04519 627 aa10.93□□□□□ -0.66
Topbp1-201ENSMUST00000035164 Spag8Q3V0Q6 470 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms