RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 A0A0G2JN53 185 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 URADA6NGE7 173 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TXNDC9O14530 226 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 ZSCAN9O15535 394 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 OR2B3O76000 313 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 CDK4P11802 303 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 NCF2P19878 526 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 RAB8AP61006 207 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 ACY1Q03154 408 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 HYAL2Q12891 473 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TERF2Q15554 542 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 RFTN2Q52LD8 501 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TMEM35AQ53FP2 167 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 SPIN4Q56A73 249 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TCTE1Q5JU00 501 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TMEM198Q66K66 360 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 ALYREFQ86V81 257 aaKnown RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 ANKS4BQ8N8V4 417 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 AGBL5Q8NDL9 886 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 RGMAQ96B86 450 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 MS4A6EQ96DS6 147 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 MARK4Q96L34 752 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 OR6C1Q96RD1 312 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 STRADBQ9C0K7 418 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 SLC6A16Q9GZN6 736 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 SPRTNQ9H040 489 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 AKAP7Q9P0M2 348 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-230ENST00000641927 HEY2Q9UBP5 337 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 SERTAD3Q9UJW9 196 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 TRIM33Q9UPN9 1127 aa16.65■□□□□ 0.26
PHGDH-230ENST00000641927 GVINP1Q7Z2Y8 2422 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 EFCAB7A8K855 629 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 RTCAO00442 366 aaKnown RBP16.64■□□□□ 0.25
PHGDH-230ENST00000641927 SLC30A4O14863 429 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 MYO1DO94832 1006 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF888P0CJ79 500 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-230ENST00000641927 CEACAM1P13688 526 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 PRPH2P23942 346 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 TGM3Q08188 693 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 TBL3Q12788 808 aaKnown RBP16.64■□□□□ 0.25
PHGDH-230ENST00000641927 HES3Q5TGS1 186 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 ZFAND4Q86XD8 727 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 GPR135Q8IZ08 494 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 CACNA2D3Q8IZS8 1091 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 OR2L5Q8NG80 312 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 SORBS1Q9BX66 1292 aaKnown RBP16.64■□□□□ 0.25
PHGDH-230ENST00000641927 OCIAD1Q9NX40 245 aa16.64■□□□□ 0.25
PHGDH-230ENST00000641927 POLR3HQ9Y535 204 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-230ENST00000641927 PCNX2A6NKB5 2137 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 PLPP1O14494 284 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 TM4SF5O14894 197 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 UBDO15205 165 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 CSO75390 466 aaKnown RBP16.63■□□□□ 0.25
PHGDH-230ENST00000641927 SEMA3DO95025 777 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 MT-CO3P00414 261 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 GBAP04062 536 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 PRR35P0CG20 571 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 CCKBRP32239 447 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 ITGA1P56199 1179 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 ERVK-8P63133 956 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 MAD2L1Q13257 205 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-230ENST00000641927 ISXQ2M1V0 245 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 MANEAQ5SRI9 462 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 ABHD13Q7L211 337 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 COMMD6Q7Z4G1 85 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 SRFBP1Q8NEF9 429 aaKnown RBP16.63■□□□□ 0.25
PHGDH-230ENST00000641927 OR1L3Q8NH93 324 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 CATSPER2Q96P56 530 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 KCNC2Q96PR1 638 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 DEPDC7Q96QD5 511 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 CMKLR1Q99788 373 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 EBPLQ9BY08 206 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 AICDAQ9GZX7 198 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 CLCA2Q9UQC9 943 aa16.63■□□□□ 0.25
PHGDH-230ENST00000641927 EIF3LQ9Y262 564 aaKnown RBP16.63■□□□□ 0.25
PHGDH-230ENST00000641927 ARHGAP10A1A4S6 786 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 TMX2-CTNND1H3BSU7 103 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 MSL3P1P0C860 447 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 SSR2P43308 183 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 EMX2Q04743 252 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 GRM7Q14831 915 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 ADPRMQ3LIE5 342 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 IL23RQ5VWK5 629 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 CDCP2Q5VXM1 449 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 OR4C11Q6IEV9 310 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 TMEM214Q6NUQ4 689 aaKnown RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 SPATA19Q7Z5L4 167 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 METTL4Q8N3J2 472 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 UTP15Q8TED0 518 aaKnown RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 CHTF18Q8WVB6 975 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 STON2Q8WXE9 905 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 GAL3ST3Q96A11 431 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF501Q96CX3 271 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 ZNF285Q96NJ3 590 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 COPS7BQ9H9Q2 264 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 NOP53Q9NZM5 478 aaKnown RBP16.62■□□□□ 0.25
PHGDH-230ENST00000641927 TMED5Q9Y3A6 229 aa16.62■□□□□ 0.25
PHGDH-230ENST00000641927 PTPRZ1P23471 2315 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms