RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 XAF1Q6GPH4 301 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 TMIGD1Q6UXZ0 262 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 ZNF852Q6ZMS4 543 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 GALNT5Q7Z7M9 940 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 LRRTM4Q86VH4 590 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 HORMAD1Q86X24 394 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 FAM129CQ86XR2 697 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 DCUN1D3Q8IWE4 304 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 PIK3C3Q8NEB9 887 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 CIDECQ96AQ7 238 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-211ENST00000641213 TPD52L3Q96J77 140 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 NRTNQ99748 197 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 FANCEQ9HB96 536 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 TM7SF3Q9NS93 570 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 GPATCH2Q9NW75 528 aa16.37■□□□□ 0.21
PHGDH-211ENST00000641213 HEMK1Q9Y5R4 338 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-211ENST00000641213 BCKDKO14874 412 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 GCM2O75603 506 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-211ENST00000641213 C6orf47O95873 294 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CDK4P11802 303 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 AGXTP21549 392 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 RYKP34925 604 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 TAS2R38P59533 333 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 GABARAPL2P60520 117 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 KCNJ10P78508 379 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 PHEXP78562 749 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CAMK2GQ13555 558 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-211ENST00000641213 MPEG1Q2M385 716 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 WSCD2Q2TBF2 565 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 IQCCQ4KMZ1 466 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 COX20Q5RI15 118 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CACUL1Q86Y37 369 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 C11orf65Q8NCR3 313 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 PPCDCQ96CD2 204 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CHFRQ96EP1 664 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 C7orf34Q96L11 122 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 ACAT2Q9BWD1 397 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 RAPGEFL1Q9UHV5 662 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CCDC88CQ9P219 2028 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 TMEM229AB2RXF0 380 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 H3BMQ9 156 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 GPR37L1O60883 481 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 HTR1AP08908 422 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 ERGP11308 486 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 PTX3P26022 381 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-211ENST00000641213 AQP1P29972 269 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 RPL3P39023 403 aaKnown RBP16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CRATP43155 626 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 ITGA1P56199 1179 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 FCHO2Q0JRZ9 810 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 PRSS53Q2L4Q9 553 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 OR13F1Q8NGS4 319 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 FBLIM1Q8WUP2 373 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 CNDP2Q96KP4 475 aaKnown RBP16.36■□□□□ 0.21
PHGDH-211ENST00000641213 COG8Q96MW5 612 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 SLC35A5Q9BS91 424 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 EXD2Q9NVH0 621 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 ADPRHL2Q9NX46 363 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 PDP1Q9P0J1 537 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-211ENST00000641213 AP1M2Q9Y6Q5 423 aa16.36■□□□□ 0.21
PHGDH-211ENST00000641213 MID1O15344 667 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 SUV39H1O43463 412 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 UGT2B11O75310 529 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 ATE1O95260 518 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 ETFAP13804 333 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 CASP9P55211 416 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 GRSF1Q12849 480 aaKnown RBP eCLIP16.35■□□□□ 0.21
PHGDH-211ENST00000641213 TOP3AQ13472 1001 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-211ENST00000641213 RAPSNQ13702 412 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 TEAD4Q15561 434 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 AGBL4Q5VU57 503 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 METRNLQ641Q3 311 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 ANGPTL8Q6UXH0 198 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 SPARTQ8N0X7 666 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 KRT78Q8N1N4 520 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 OXR1Q8N573 874 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 OR5K2Q8NHB8 316 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 MTERF3Q96E29 417 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 NRBF2Q96F24 287 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 SORBS1Q9BX66 1292 aaKnown RBP16.35■□□□□ 0.21
PHGDH-211ENST00000641213 PLA2G2FQ9BZM2 168 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 NAA50Q9GZZ1 169 aaKnown RBP16.35■□□□□ 0.21
PHGDH-211ENST00000641213 SPASTQ9UBP0 616 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 BLOC1S6Q9UL45 172 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 CDH7Q9ULB5 785 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 SAMHD1Q9Y3Z3 626 aaKnown RBP16.35■□□□□ 0.21
PHGDH-211ENST00000641213 CFAP20Q9Y6A4 193 aaKnown RBP16.35■□□□□ 0.21
PHGDH-211ENST00000641213 MYO10Q9HD67 2058 aa16.35■□□□□ 0.21
PHGDH-211ENST00000641213 TNFRSF21O75509 655 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 SEC14L2O76054 403 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 PCDH8O95206 1070 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 GSTM2P28161 218 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 WASP42768 502 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 LBX1P52954 281 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 CYP2A13Q16696 494 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 C9orf50Q5SZB4 431 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-211ENST00000641213 C17orf64Q86WR6 236 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 DOHHQ9BU89 302 aa16.34■□□□□ 0.21
PHGDH-211ENST00000641213 TRIT1Q9H3H1 467 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms