RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ARAP2Q8WZ64 1704 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 TIMP1P01033 207 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 HMGN1P05114 100 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 GSTM3P21266 225 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 RPS21P63220 83 aaKnown RBP16.95■□□□□ 0.3
SCARB2-223ENST00000640640 CAPSLQ8WWF8 208 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 SAMD11Q96NU1 681 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 SMIM14Q96QK8 99 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 MAPKAP1Q9BPZ7 522 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 CLEC4AQ9UMR7 237 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 HCN4Q9Y3Q4 1203 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 STRCQ7RTU9 1775 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 GNB5O14775 395 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 SLC16A8O95907 504 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 HTRA3P83110 453 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 AMZ1Q400G9 498 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 GPR26Q8NDV2 337 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 UCK2Q9BZX2 261 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 IL3P08700 152 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 IL18R1Q13478 541 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 MARVELD2Q8N4S9 558 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 KLHDC9Q8NEP7 349 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 HUS1BQ8NHY5 278 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-223ENST00000640640 TUBA8Q9NY65 449 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-223ENST00000640640 MAP10Q9P2G4 905 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 COPS7AQ9UBW8 275 aa16.95■□□□□ 0.3
SCARB2-223ENST00000640640 ARCN1P48444 511 aaKnown RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 TRIM63Q969Q1 353 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 RHBDF1Q96CC6 855 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 C20orf27Q9GZN8 174 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 ZSCAN32Q9NX65 697 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 GPN3Q9UHW5 284 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 SPIN1Q9Y657 262 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 IGLON5A6NGN9 336 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 PPP6CO00743 305 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 RPS17P08708 135 aaKnown RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 CD9P21926 228 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 OMPP47874 163 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 OGFRL1Q5TC84 451 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 LCN8Q6JVE9 175 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 FBXO46Q6PJ61 603 aaPredicted RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 ZNF773Q6PK81 442 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 LINC00471Q8N535 108 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 UTP4Q969X6 686 aaKnown RBP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 COQ7Q99807 217 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 SNTG1Q9NSN8 517 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 GPR39O43194 453 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 ABCB7O75027 752 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 CSTF2P33240 577 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCARB2-223ENST00000640640 SHMT2P34897 504 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 KIAA1161Q6NSJ0 714 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 KLHL6Q8WZ60 621 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 KCNN2Q9H2S1 579 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 PCDHGA7Q9Y5G6 932 aa16.94■□□□□ 0.3
SCARB2-223ENST00000640640 MYOCOSA0A1B0GUC4 107 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 A0A1W2PQU0 124 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 PRDX3P30048 256 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ADRA1AP35348 466 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ST3GAL3Q11203 375 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 FADDQ13158 208 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 SEMA3BQ13214 749 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 NRSN1Q8IZ57 195 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 UFD1Q92890 307 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 TRMT2BQ96GJ1 504 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ZIC5Q96T25 663 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 LIN28AQ9H9Z2 209 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 TRNAU1APQ9NX07 287 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 RHCGQ9UBD6 479 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 H0YAE9 185 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 SORBS2O94875 1100 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ATXN1LP0C7T5 689 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 MATN1P21941 496 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 GRIA2P42262 883 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 INHBCP55103 352 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 RBBP4Q09028 425 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 RUNX3Q13761 415 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 SLC30A6Q6NXT4 461 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 FRRS1Q6ZNA5 592 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 USP43Q70EL4 1123 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 PPP1R14AQ96A00 147 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 OR2M4Q96R27 311 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 PPIEQ9UNP9 301 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 HHLA1C9JL84 531 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 SOX14O95416 240 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ALPPL2P10696 532 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 PFKLP17858 780 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 GABRB3P28472 473 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 IL12BP29460 328 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 WDR5P61964 334 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ATP6V1C2Q8NEY4 427 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 C12orf43Q96C57 262 aaKnown RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 SLC46A2Q9BY10 475 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 TAF4O00268 1085 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ASGR2P07307 311 aa16.93■□□□□ 0.3
SCARB2-223ENST00000640640 HOXD9P28356 352 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 CTSOP43234 321 aaPredicted RBP16.93■□□□□ 0.3
SCARB2-223ENST00000640640 ARF5P84085 180 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms