RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 HCFC1R1Q9NWW0 138 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 RFPL2O75678 378 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 POP4O95707 220 aaKnown RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 LRG1P02750 347 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 CATP04040 527 aaKnown RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 AP1S2P56377 157 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 SCARB2Q14108 478 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 LHX8Q68G74 356 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 TMEM220Q6QAJ8 160 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 Q6ZNB5 142 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 TRAPPC5Q8IUR0 188 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF740Q8NDX6 193 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 SCHIP1Q9P0W5 487 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 PRKAB1Q9Y478 270 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 FADS2P1A8MWK0 482 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 SNPHO15079 494 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 CCL16O15467 120 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 TPST2O60704 377 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 PPP5CP53041 499 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 CXCR4P61073 352 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 DAB2P98082 770 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 GGTA1PQ4G0N0 100 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 TNFAIP8L2Q6P589 184 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 GDPD4Q6W3E5 623 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 TRMT11Q7Z4G4 463 aaKnown RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 ARMC8Q8IUR7 673 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 CFAP206Q8IYR0 622 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 SYNPOQ8N3V7 929 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 OR8J2Q8NGG1 315 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 FIBINQ8TAL6 211 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 PHF10Q8WUB8 498 aaKnown RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 FBLIM1Q8WUP2 373 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 MYDGFQ969H8 173 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 CEP19Q96LK0 163 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 OR5M11Q96RB7 305 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 NRTNQ99748 197 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 LINC00597Q9H2U6 94 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 C5AR2Q9P296 337 aa14.03□□□□□ -0.16
SCARB2-221ENST00000640341 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-221ENST00000640341 GFYI3L273 518 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 KLK1P06870 262 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 AZGP1P25311 298 aaKnown RBP14.02□□□□□ -0.16
SCARB2-221ENST00000640341 RCVRNP35243 200 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 TAS2R50P59544 299 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 NKX3-2P78367 333 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 CSTF3Q12996 717 aaKnown RBP14.02□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF284Q2VY69 593 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 LSRQ86X29 649 aaPredicted RBP14.02□□□□□ -0.16
SCARB2-221ENST00000640341 AMER2Q8N7J2 671 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 WDR20Q8TBZ3 569 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 IPCEF1Q8WWN9 437 aaPredicted RBP14.02□□□□□ -0.16
SCARB2-221ENST00000640341 HRASLS5Q96KN8 279 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 VPS35Q96QK1 796 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 PLAGL1Q9UM63 463 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 SH2B3Q9UQQ2 575 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 KCNE2Q9Y6J6 123 aa14.02□□□□□ -0.16
SCARB2-221ENST00000640341 SMIM30A4D0T7 59 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 ZNF197O14709 1029 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 CKMT1AP12532 417 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 IDSP22304 550 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 CSNK1DP48730 415 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 SELENOWP63302 87 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 RAE1P78406 368 aaKnown RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 SLBPQ14493 270 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 LIPJQ5W064 366 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 TPGS2Q68CL5 300 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 KLHL17Q6TDP4 642 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 CACUL1Q86Y37 369 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 VANGL1Q8TAA9 524 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 WDR48Q8TAF3 677 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 TRMT2BQ96GJ1 504 aaKnown RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 GABARAPL1Q9H0R8 117 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 ERVK13-1Q9NX77 482 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 STOML2Q9UJZ1 356 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 MICAL3Q7RTP6 2002 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 CLCA1A8K7I4 914 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 ADAMDEC1O15204 470 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 GCM2O75603 506 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 SPNP16150 400 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 IL1RNP18510 177 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 HNF4AP41235 474 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 KCNC4Q03721 635 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 TSTQ16762 297 aaKnown RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 SLC5A12Q1EHB4 618 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 RPS26P11Q5JNZ5 115 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 GALNT13Q8IUC8 556 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 OR8H2Q8N162 312 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 AQP11Q8NBQ7 271 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 WDR36Q8NI36 951 aaKnown RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 CAPSLQ8WWF8 208 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 OTUB1Q96FW1 271 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-221ENST00000640341 FOPNLQ96NB1 174 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 ZNF558Q96NG5 402 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 FAM129BQ96TA1 746 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 FBXO8Q9NRD0 319 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 SPG21Q9NZD8 308 aa14.02□□□□□ -0.17
SCARB2-221ENST00000640341 AGAP14A8MT82 685 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 H3BN98 237 aa14.01□□□□□ -0.17
SCARB2-221ENST00000640341 PSMD11O00231 422 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms