RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 PRSS23O95084 383 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 PCDH8O95206 1070 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 TFAP2AP05549 437 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 SYPP08247 313 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 LAMP1P11279 417 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 C21orf58P58505 322 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 MEF2AQ02078 507 aaPredicted RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 SRSF11Q05519 484 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 BIRC2Q13490 618 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 FAM98BQ52LJ0 330 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 TMEM214Q6NUQ4 689 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 AMZ2Q86W34 360 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CLECL1Q8IZS7 167 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 TNIP2Q8NFZ5 429 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 FAM120BQ96EK7 910 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 METTL2AQ96IZ6 378 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 ADI1Q9BV57 179 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CAPN10Q9HC96 672 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 ADAMTS9Q9P2N4 1935 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 A0A1W2PP55 124 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 PIPSLA2A3N6 862 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CDX4O14627 284 aaPredicted RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 SCAMP2O15127 329 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 KCNK5O95279 499 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 ZNF23P17027 643 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 EFNA1P20827 205 aaPredicted RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CHRNB3Q05901 458 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 MERTKQ12866 999 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 APOFQ13790 326 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 HKDC1Q2TB90 917 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 C2orf73Q8N5S3 287 aaPredicted RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 FAM47BQ8NA70 645 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 OR52E4Q8NGH9 312 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 FAM162AQ96A26 154 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 PANX1Q96RD7 426 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 GPR174Q9BXC1 333 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CCDC177Q9NQR7 707 aaPredicted RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 OLAHQ9NV23 265 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 AP3M1Q9Y2T2 418 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 DYRK1BQ9Y463 629 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 OR1A2Q9Y585 309 aa13.29□□□□□ -0.28
ATRIP-208ENST00000639561 CFAP20Q9Y6A4 193 aaKnown RBP13.29□□□□□ -0.28
ATRIP-208ENST00000639561 FPGTO14772 594 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 CREG1O75629 220 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 PRKD3O94806 890 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SCELO95171 688 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 CLPTM1O96005 669 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 DNTTP04053 509 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 ANXA4P09525 319 aaPredicted RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 C1GALT1C1LP0DN25 315 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 ATP6V1B1P15313 513 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 HNRNPFP52597 415 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 FGL2Q14314 439 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SLC36A3Q495N2 470 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 ZNF776Q68DI1 518 aaPredicted RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 UNC5DQ6UXZ4 953 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 LAS2Q8IYD9 372 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 HDDC3Q8N4P3 179 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 METTL25Q8N6Q8 603 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 ZNF740Q8NDX6 193 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SLC5A11Q8WWX8 675 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 NCLNQ969V3 563 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 REXO5Q96IC2 774 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 BDH2Q9BUT1 245 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 EFCAB11Q9BUY7 163 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 DCAF13Q9NV06 445 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SCML1Q9UN30 329 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 EXO1Q9UQ84 846 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 GABRR3A8MPY1 467 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 PABPC4LP0CB38 370 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 TIA1P31483 386 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 TRPC1P48995 793 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 NOVA1P51513 510 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 CLCN2P51788 898 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 ABHD18Q0P651 414 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 UAP1L1Q3KQV9 507 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 GPR155Q7Z3F1 870 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 LRRTM4Q86VH4 590 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 OXR1Q8N573 874 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 MAGEE2Q8TD90 523 aaPredicted RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 DNASE2BQ8WZ79 361 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 TMBIM1Q969X1 311 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SLC47A1Q96FL8 570 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 UGT2B28Q9BY64 529 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 EHD1Q9H4M9 534 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 PRM3Q9NNZ6 103 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 DMRT3Q9NQL9 472 aa13.28□□□□□ -0.28
ATRIP-208ENST00000639561 FAM120CQ9NX05 1096 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 ZFR2Q9UPR6 939 aaKnown RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 MAGED1Q9Y5V3 778 aaPredicted RBP13.28□□□□□ -0.28
ATRIP-208ENST00000639561 SAP18O00422 153 aaKnown RBP13.27□□□□□ -0.29
ATRIP-208ENST00000639561 PCDH7O60245 1069 aa13.27□□□□□ -0.29
ATRIP-208ENST00000639561 DEAF1O75398 565 aaPredicted RBP13.27□□□□□ -0.29
ATRIP-208ENST00000639561 MYO1DO94832 1006 aa13.27□□□□□ -0.29
ATRIP-208ENST00000639561 OR6B1O95007 311 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms