RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CRYBA2P53672 197 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 RAD23AP54725 363 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 MPEG1Q2M385 716 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 RFX4Q33E94 735 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 SORBS1Q9BX66 1292 aaKnown RBP20.62■□□□□ 0.89
CLN6-224ENST00000638076 GPATCH2Q9NW75 528 aa20.62■□□□□ 0.89
CLN6-224ENST00000638076 RPN2P04844 631 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 GDI1P31150 447 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 POLR2IP36954 125 aaKnown RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 RPL3P39023 403 aaKnown RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 ARHGDIAP52565 204 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 RAB39AQ14964 217 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 MEP1AQ16819 746 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 COX20Q5RI15 118 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 ZNF773Q6PK81 442 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 C17orf64Q86WR6 236 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 HORMAD1Q86X24 394 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 DNAJC5GQ8N7S2 189 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 ZNF513Q8N8E2 541 aaPredicted RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 MYADMQ96S97 322 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 SLC35A5Q9BS91 424 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 TEX101Q9BY14 249 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 EPOPA6NHQ4 379 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 KMOO15229 486 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 LINC01565O15544 149 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 MITFO75030 526 aaPredicted RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 PAK4O96013 591 aaPredicted RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 CRHBPP24387 322 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 IGFBP5P24593 272 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 MVDP53602 400 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 ARHGAP19Q14CB8 494 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 NEDD8Q15843 81 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 C2orf27AQ580R0 203 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 RBM48Q5RL73 367 aaKnown RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 NUDT18Q6ZVK8 323 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 CYP4Z1Q86W10 505 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 HDAC2Q92769 488 aaKnown RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 ISOC1Q96CN7 298 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 GABARAPL1Q9H0R8 117 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 WDR26Q9H7D7 661 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 CXorf21Q9HAI6 301 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 EBF1Q9UH73 591 aa20.61■□□□□ 0.89
CLN6-224ENST00000638076 DNMT3AQ9Y6K1 912 aaPredicted RBP20.61■□□□□ 0.89
CLN6-224ENST00000638076 GPR37L1O60883 481 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 IL3P08700 152 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 DNAJA1P31689 397 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 PCGF2P35227 344 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CLCNKAP51800 687 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CTBSQ01459 385 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 ENPP2Q13822 863 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 IRF4Q15306 451 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CTU2Q2VPK5 515 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 DUS1LQ6P1R4 473 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 SYCE2Q6PIF2 218 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 GALNT5Q7Z7M9 940 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 C11orf65Q8NCR3 313 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CHDHQ8NE62 594 aaPredicted RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 KLK6Q92876 244 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CDCA3Q99618 268 aaPredicted RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 LMAN2LQ9H0V9 348 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CUEDC1Q9NWM3 386 aaPredicted RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 CDC14AQ9UNH5 594 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 ADH1BP00325 375 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 ETFAP13804 333 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 C5AR1P21730 350 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 PSMB5P28074 263 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 SOX9P48436 509 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 DAPP51397 102 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 CD47Q08722 323 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 TEAD4Q15561 434 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 PRSS53Q2L4Q9 553 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 ZC3H12BQ5HYM0 836 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 C6orf141Q5SZD1 244 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 PARM1Q6UWI2 310 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 SLC9B2Q86UD5 537 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 ERI1Q8IV48 349 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 FGF14Q92915 247 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 MENTQ9BUN1 341 aa20.6■□□□□ 0.89
CLN6-224ENST00000638076 TRIT1Q9H3H1 467 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 ZFR2Q9UPR6 939 aaKnown RBP20.6■□□□□ 0.89
CLN6-224ENST00000638076 ANKDD1BA6NHY2 528 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 SLC16A6O15403 523 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 SUV39H1O43463 412 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 SLC35G4P0C7Q5 338 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 FPR1P21462 350 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 SEC13P55735 322 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 CYP4F2P78329 520 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 FGL2Q14314 439 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 ZNF691Q5VV52 312 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 MMP21Q8N119 569 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 ADPRHL2Q9NX46 363 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 ACSL6Q9UKU0 697 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 SAMHD1Q9Y3Z3 626 aaKnown RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 GCM2O75603 506 aaPredicted RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 TBX6O95947 436 aaPredicted RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 TPP2P29144 1249 aaPredicted RBP20.59■□□□□ 0.89
CLN6-224ENST00000638076 TTKP33981 857 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 HSD17B2P37059 387 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 ISL1P61371 349 aa20.59■□□□□ 0.89
CLN6-224ENST00000638076 KCNJ10P78508 379 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms