RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ABRACLQ9P1F3 81 aa18.8■□□□□ 0.6
CACNA1A-257ENST00000638009 CHD1O14646 1710 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CRB1P82279 1406 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CRTAPO75718 401 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CDRT1O95170 752 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 PER3P56645 1201 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 WNT3AP56704 352 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CCNJQ5T5M9 372 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 FAM129CQ86XR2 697 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 LRRC52Q8N7C0 313 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 LRRC4CQ9HCJ2 640 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 TAAR1Q96RJ0 339 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 FUNDC2Q9BWH2 189 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 SLIT1O75093 1534 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 OR5H15A6NDH6 313 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 OR5H14A6NHG9 310 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 OR5H1A6NKK0 313 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 ARL13AQ5H913 290 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 C17orf62Q9BQA9 187 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 PRDM12Q9H4Q4 367 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 SC5DO75845 299 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CDK1P06493 297 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CACNA1BQ00975 2339 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 TMEM41BQ5BJD5 291 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 DPY19L4Q7Z388 723 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 TMEM199Q8N511 208 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 PNPOQ9NVS9 261 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 PCDHB14Q9Y5E9 798 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 NOBOXO60393 691 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 PSMD10O75832 226 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CELF2O95319 508 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 JUNP05412 331 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CD44P16070 742 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 DGKGP49619 791 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 OR52B2Q96RD2 323 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 KLF15Q9UIH9 416 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 C1RP00736 705 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 C2P06681 752 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 RTP1P59025 263 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 PLGLB1Q02325 96 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 CAMKVQ8NCB2 501 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 OR4K2Q8NGD2 314 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 LHX5Q9H2C1 402 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 COL20A1Q9P218 1284 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 ST14Q9Y5Y6 855 aa18.79■□□□□ 0.6
CACNA1A-257ENST00000638009 J3QLW9 94 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ANKRD28O15084 1053 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ZNF19P17023 458 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ENTPD1P49961 510 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 UPRTQ96BW1 309 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 OR2M4Q96R27 311 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 GTF3C1Q12789 2109 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 RHOP08100 348 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 MPSTP25325 297 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 PEA15Q15121 130 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 AQP11Q8NBQ7 271 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 TFB2MQ9H5Q4 396 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 PEX12O00623 359 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 PBX3P40426 434 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 KCNC1P48547 511 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 MITD1Q8WV92 249 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 FNIP2Q9P278 1114 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 CEP250Q9BV73 2442 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 GP1BBP13224 206 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 TMEM214Q6NUQ4 689 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ZNF598Q86UK7 904 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 CPXM1Q96SM3 734 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 CENPOQ9BU64 300 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 UBE2J1Q9Y385 318 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 TLR5O60602 858 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 DPEP2Q9H4A9 486 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ZNF701Q9NV72 531 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 DHDHQ9UQ10 334 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 POMPQ9Y244 141 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 PTPRAP18433 802 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 GTF2H5Q6ZYL4 71 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 FAM160A2Q8N612 972 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 CASTOR1Q8WTX7 329 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 SMPDL3BQ92485 455 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 TAAR8Q969N4 342 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 CBY1Q9Y3M2 126 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 PCDHGA2Q9Y5H1 932 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 RARRES1P49788 294 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ZNF675Q8TD23 568 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 ZDHHC12Q96GR4 267 aa18.78■□□□□ 0.6
CACNA1A-257ENST00000638009 CDNFQ49AH0 187 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 ZSWIM9Q86XI8 627 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 IL12RB2Q99665 862 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 LATO43561 262 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 FABP6P51161 128 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 ESCO2Q56NI9 601 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 PRAMEF13Q5VWM6 474 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 GPR142Q7Z601 462 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 OR8S1Q8NH09 359 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 RBP7Q96R05 134 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 TTYH2Q9BSA4 534 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 PDGFDQ9GZP0 370 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
CACNA1A-257ENST00000638009 BDKRB2P30411 391 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms