RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZFC3H1O60293 1989 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 THADAQ6YHU6 1953 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PLXNB3Q9ULL4 1909 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 A0A1W2PPW3 197 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TRBC2A0A5B9 178 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ARHGEF37A1IGU5 675 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 NEMP2A6NFY4 417 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 GLOD5A6NK44 160 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TSPY2A6NKD2 308 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 C2orf81A6NN90 581 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 E9PQ18 207 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 FPGTO14772 594 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ARPC2O15144 300 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC22A2O15244 555 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 P4HA2O15460 535 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ADAM20O43506 726 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SNX3O60493 162 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 EIF5BO60841 1220 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RNASEH1O60930 286 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SRSF10O75494 262 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PSMD10O75832 226 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MOCS3O95396 460 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 IGHV2-70P01814 119 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 IGHEP01854 428 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 APOA4P06727 396 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 LDHCP07864 332 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RAB40ALP0C0E4 278 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OR52Z1P0C646 297 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 LINGO3P0C6S8 592 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TSPY3P0CV98 308 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TSPY8P0CW00 308 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC2A2P11168 524 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 GATA1P15976 413 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CEBPBP17676 345 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ERCC2P18074 760 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RPL35AP18077 110 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TYMPP19971 482 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PRKACGP22612 351 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CPT2P23786 658 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ALDH1B1P30837 517 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MC5RP33032 325 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SFTPDP35247 375 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OPRL1P41146 370 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TSFMP43897 325 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RAB28P51157 221 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 DNA2P51530 1060 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CCR3P51677 355 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 XGP55808 180 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MAZP56270 477 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MYL7Q01449 175 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TSPY1Q01534 308 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 KLC1Q07866 573 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TRAP1Q12931 704 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SGCGQ13326 291 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 DRP2Q13474 957 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CAMK2DQ13557 499 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CUL3Q13618 768 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ALCAMQ13740 583 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ENPP2Q13822 863 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SNTB1Q13884 538 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 BAATQ14032 418 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 BECN1Q14457 450 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 IL11RAQ14626 422 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TMEM132DQ14C87 1099 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 HERC3Q15034 1050 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 P2RY6Q15077 328 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 NECTIN1Q15223 517 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RASA2Q15283 850 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TEAD2Q15562 447 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 KLHL26Q53HC5 615 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 FASTKD1Q53R41 847 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TAF1BQ53T94 588 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC25A53Q5H9E4 307 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 FGD3Q5JSP0 725 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SPECC1Q5M775 1068 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ARMC4Q5T2S8 1044 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ADAMTSL4-AS1Q5T5F5 129 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 GARNL3Q5VVW2 1013 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CES4AQ5XG92 561 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 LYSMD4Q5XG99 296 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM109BQ6ICB4 259 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 KRT80Q6KB66 452 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PRR5LQ6MZQ0 368 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 NAA16Q6N069 864 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 DOK6Q6PKX4 331 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 FIP1L1Q6UN15 594 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 BTN2A1Q7KYR7 527 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 G2E3Q7L622 706 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 LRRTM1Q86UE6 522 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ADIPOR2Q86V24 386 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 C11orf53Q8IXP5 236 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MMD2Q8IY49 270 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF440Q8IYI8 595 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 KIRREL3Q8IZU9 778 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 LSMEM2Q8N112 164 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 NDUFAF2Q8N183 169 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 KLHDC1Q8N7A1 406 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF611Q8N823 705 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF614Q8N883 585 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TCEANCQ8N8B7 351 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms