RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HPRP00739 348 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 CST1P01037 141 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 GBAP04062 536 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 NDUFV2P19404 249 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 MYF6P23409 242 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 BSGP35613 385 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 ABATP80404 500 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 SLC36A3Q495N2 470 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 CCNYL2Q5T2Q4 361 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 IER5LQ5T953 404 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 KRT80Q6KB66 452 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 TMEM92Q6UXU6 159 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 WASH2PQ6VEQ5 465 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 ADHFE1Q8IWW8 467 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 ZCCHC7Q8N3Z6 543 aaKnown RBP21.11■□□□□ 0.97
PNKP-220ENST00000627232 NATD1Q8N6N6 113 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 TTLQ8NG68 377 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 OR52E1Q8NGJ3 308 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 OR2A1Q8NGT9 310 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 WDR92Q96MX6 357 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 ZNF717Q9BY31 904 aaPredicted RBP21.11■□□□□ 0.97
PNKP-220ENST00000627232 MRPS26Q9BYN8 205 aaKnown RBP21.11■□□□□ 0.97
PNKP-220ENST00000627232 KIR3DX1Q9H7L2 352 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 SPASTQ9UBP0 616 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 ADAM29Q9UKF5 820 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 MMP17Q9ULZ9 603 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 ICKQ9UPZ9 632 aa21.11■□□□□ 0.97
PNKP-220ENST00000627232 TRBC2A0A5B9 178 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 LRRC72A6NJI9 287 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 CAPN5O15484 640 aaPredicted RBP21.1■□□□□ 0.97
PNKP-220ENST00000627232 CLEC3AO75596 197 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 IL3P08700 152 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 DDX5P17844 614 aaKnown RBP21.1■□□□□ 0.97
PNKP-220ENST00000627232 EFNA1P20827 205 aaPredicted RBP21.1■□□□□ 0.97
PNKP-220ENST00000627232 HNRNPA2B1P22626 353 aaKnown RBP21.1■□□□□ 0.97
PNKP-220ENST00000627232 MAGEA2P43356 314 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 ALDH3A2P51648 485 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 MC1RQ01726 317 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 RGNQ15493 299 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 DHRSXQ8N5I4 330 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 TRIML2Q8N7C3 387 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 PRDM8Q9NQV8 689 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 COLEC10Q9Y6Z7 277 aa21.1■□□□□ 0.97
PNKP-220ENST00000627232 NUP214P35658 2090 aaPredicted RBP21.1■□□□□ 0.97
PNKP-220ENST00000627232 TNFRSF10CO14798 259 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 PRICKLE3O43900 615 aaPredicted RBP21.09■□□□□ 0.97
PNKP-220ENST00000627232 GSTM2P28161 218 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 KDELR2P33947 212 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 TPMTP51580 245 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 GAB1Q13480 694 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 DAG1Q14118 895 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ADRM1Q16186 407 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 IYDQ6PHW0 289 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ABRAXAS1Q6UWZ7 409 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 MAGEE2Q8TD90 523 aaPredicted RBP21.09■□□□□ 0.97
PNKP-220ENST00000627232 OR1E3Q8WZA6 343 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 RGMAQ96B86 450 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 TBC1D20Q96BZ9 403 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 SDCCAG3Q96C92 435 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 RDH12Q96NR8 316 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 F2RL3Q96RI0 385 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 RAD21L1Q9H4I0 556 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 XKR8Q9H6D3 395 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 TMEM184CQ9NVA4 438 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 HEATR5BQ9P2D3 2071 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 FEZF1A0PJY2 475 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 H0YAE9 185 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 NDUFS4O43181 175 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 OR1F1O43749 312 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 C6orf47O95873 294 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 C1QCP02747 245 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 HTR1BP28222 390 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 NDUFS1P28331 727 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ACSL1P33121 698 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 PCGF2P35227 344 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 CAPGP40121 348 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ARSFP54793 590 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 CLDN2P57739 230 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 HBA1P69905 142 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 CYP4F2P78329 520 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 BIRC2Q13490 618 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 MPEG1Q2M385 716 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 RNF220Q5VTB9 566 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 TMEM214Q6NUQ4 689 aaKnown RBP21.09■□□□□ 0.97
PNKP-220ENST00000627232 TBPL2Q6SJ96 375 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ENPP7Q6UWV6 458 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 EIF3MQ7L2H7 374 aaKnown RBP21.09■□□□□ 0.97
PNKP-220ENST00000627232 NUDT13Q86X67 352 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ZDHHC13Q8IUH4 622 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 ZNF764Q96H86 408 aaPredicted RBP21.09■□□□□ 0.97
PNKP-220ENST00000627232 BMFQ96LC9 184 aa21.09■□□□□ 0.97
PNKP-220ENST00000627232 MRPS30Q9NP92 439 aaKnown RBP21.09■□□□□ 0.97
PNKP-220ENST00000627232 F5P12259 2224 aa21.08■□□□□ 0.97
PNKP-220ENST00000627232 TCRBV21S2A2A0A5A6 115 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 OR52A4PA6NMU1 304 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 G3V2T6 193 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 PLOD2O00469 737 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 GNGT2O14610 69 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 GABRG2P18507 467 aa21.08■□□□□ 0.96
PNKP-220ENST00000627232 MAPK12P53778 367 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms