RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CYP2A6P11509 494 aaPredicted RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 PABPC1P11940 636 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 GADD45AP24522 165 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 RECQLP46063 649 aaPredicted RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 MVDP53602 400 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CDH12P55289 794 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CSNK2BP67870 215 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 SPIBQ01892 262 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 TEAD4Q15561 434 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 TIGD6Q17RP2 521 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 SPIN4Q56A73 249 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 BRAT1Q6PJG6 821 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 DDX53Q86TM3 631 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 SLC22A16Q86VW1 577 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 MINDY2Q8NBR6 621 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 METTL2AQ96IZ6 378 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 NIPSNAP1Q9BPW8 284 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CORO1BQ9BR76 489 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ATP11BQ9Y2G3 1177 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 MICAL3Q7RTP6 2002 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 SAP18O00422 153 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 RNASET2O00584 256 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 NPC1O15118 1278 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ADAMDEC1O15204 470 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 C6orf47O95873 294 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ALOX5P09917 674 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ZNF8P17098 575 aaPredicted RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 MC1RQ01726 317 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ARSIQ5FYB1 569 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 HENMT1Q5T8I9 393 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 DNAJC22Q8N4W6 341 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 OR56A3Q8NH54 315 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 UTP15Q8TED0 518 aaKnown RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 SORCS1Q8WY21 1168 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 HHIPL1Q96JK4 782 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 MTG2Q9H4K7 406 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 GPR83Q9NYM4 423 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 ACSL6Q9UKU0 697 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 PRAMEF25A6NGN4 478 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CLCA1A8K7I4 914 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 J3KTA2 159 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 M0R129 80 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CD40LGP29965 261 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 PPP5CP53041 499 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 EXOC3L2Q2M3D2 409 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 TRAM1L1Q8N609 369 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 NFKBIDQ8NI38 313 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 BTN2A2Q8WVV5 523 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 FCGR1BQ92637 280 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 MYDGFQ969H8 173 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CIDECQ96AQ7 238 aaPredicted RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 TCF25Q9BQ70 676 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 SLC35A5Q9BS91 424 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 TMEM121BQ9BXQ6 578 aaPredicted RBP10.82□□□□□ -0.68
VARS2-213ENST00000625423 GIN1Q9NXP7 522 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 SPASTQ9UBP0 616 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 OBSL1O75147 1896 aa10.82□□□□□ -0.68
VARS2-213ENST00000625423 CXorf51AA0A1B0GTR3 108 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 CDK1P06493 297 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 STSP08842 583 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 DBTP11182 482 aaKnown RBP10.81□□□□□ -0.68
VARS2-213ENST00000625423 TIMP2P16035 220 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 DCDC1P59894 354 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SCARB2Q14108 478 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 TBCEQ15813 527 aaPredicted RBP10.81□□□□□ -0.68
VARS2-213ENST00000625423 ZNF404Q494X3 552 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 IFI44LQ53G44 452 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 MED27Q6P2C8 311 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SLCO4C1Q6ZQN7 724 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 LGI4Q8N135 537 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ZNF784Q8NCA9 323 aaPredicted RBP10.81□□□□□ -0.68
VARS2-213ENST00000625423 OR9Q2Q8NGE9 314 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 OR5AK3PQ8NH89 298 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 CYB5D2Q8WUJ1 264 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 PSD2Q9BQI7 771 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SACM1LQ9NTJ5 587 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 PLCXD1Q9NUJ7 323 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SH2B3Q9UQQ2 575 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 PCDHGA2Q9Y5H1 932 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 KCNE2Q9Y6J6 123 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SLC5A10A0PJK1 596 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 AQP9O43315 295 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ATG13O75143 517 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 TNFRSF21O75509 655 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 POU2F1P14859 743 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 FUT4P22083 530 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 GRK5P34947 590 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 CTSKP43235 329 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ZNF284Q2VY69 593 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SOWAHCQ53LP3 525 aaPredicted RBP10.81□□□□□ -0.68
VARS2-213ENST00000625423 COLEC12Q5KU26 742 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 IER5LQ5T953 404 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 AGAP7PQ5VUJ5 663 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 TMEM215Q68D42 235 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 ADIPOR2Q86V24 386 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
VARS2-213ENST00000625423 OR4C15Q8NGM1 316 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms