RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 KIR3DL1P43629 444 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 SKP1P63208 163 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 DHX9Q08211 1270 aaKnown RBP17.8■□□□□ 0.44
SMN1-211ENST00000625245 SP140Q13342 867 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 C3P1Q6ZMU1 363 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 ZNF662Q6ZS27 426 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 SIAH3Q8IW03 269 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 LGI4Q8N135 537 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 GHDCQ8N2G8 530 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 TBC1D19Q8N5T2 526 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 ELP5Q8TE02 316 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 MS4A14Q96JA4 679 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 ARL15Q9NXU5 204 aa17.8■□□□□ 0.44
SMN1-211ENST00000625245 CCDC168Q8NDH2 2452 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 ZNF888P0CJ79 500 aaPredicted RBP17.79■□□□□ 0.44
SMN1-211ENST00000625245 ZNF24P17028 368 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 TPP2P29144 1249 aaPredicted RBP17.79■□□□□ 0.44
SMN1-211ENST00000625245 SSTR2P30874 369 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 MAGEA3P43357 314 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 CYB561P49447 251 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 RGS1Q08116 209 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 RBM20Q5T481 1227 aaKnown RBP17.79■□□□□ 0.44
SMN1-211ENST00000625245 CCDC137Q6PK04 289 aaKnown RBP17.79■□□□□ 0.44
SMN1-211ENST00000625245 DOLPP1Q86YN1 238 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 CEP97Q8IW35 865 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 AFAP1L2Q8N4X5 818 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 CPSF7Q8N684 471 aaKnown RBP17.79■□□□□ 0.44
SMN1-211ENST00000625245 NAT8LQ8N9F0 302 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 C2CD4AQ8NCU7 369 aaPredicted RBP17.79■□□□□ 0.44
SMN1-211ENST00000625245 ABHD11Q8NFV4 315 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 SNF8Q96H20 258 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 TRIM51Q9BSJ1 452 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 CSMD2Q7Z408 3487 aa17.79■□□□□ 0.44
SMN1-211ENST00000625245 DCHS2Q6V1P9 2916 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 TRBC2A0A5B9 178 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 A8MUA0 341 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 PRRG2O14669 202 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 NME2P1O60361 137 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 PRMT3O60678 531 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 TSPAN12O95859 305 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 NME2P22392 152 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 HNF4AP41235 474 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 CDKN2DP55273 166 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 BTG2P78543 158 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 PWP1Q13610 501 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 RNFT1Q5M7Z0 435 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 CATSPEREQ5SY80 951 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 DUPD1Q68J44 220 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 OR4K1Q8NGD4 311 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 GABPB2Q8TAK5 448 aaPredicted RBP17.78■□□□□ 0.44
SMN1-211ENST00000625245 TMEM125Q96AQ2 219 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 TRIM54Q9BYV2 358 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 RHBGQ9H310 441 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 NEU2Q9Y3R4 380 aa17.78■□□□□ 0.44
SMN1-211ENST00000625245 GUCA1CO95843 209 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 PGAM1P18669 254 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 GABRB3P28472 473 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 RIPPLY3P57055 190 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 MLF1P58340 268 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 KRTAP10-9P60411 292 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 IL2P60568 153 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 PDAP1Q13442 181 aaKnown RBP17.77■□□□□ 0.44
SMN1-211ENST00000625245 CSHL1Q14406 222 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 CRYMQ14894 314 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 ABHD13Q7L211 337 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 PPIL6Q8IXY8 311 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 OR56A3Q8NH54 315 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 CHTF18Q8WVB6 975 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 SDCCAG3Q96C92 435 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 OR4K3Q96R72 315 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 OLFM1Q99784 485 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 SARGQ9BW04 601 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 PPT2Q9UMR5 302 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 C2CD3Q4AC94 2353 aa17.77■□□□□ 0.44
SMN1-211ENST00000625245 E9PLN8 166 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 PSMD12O00232 456 aaPredicted RBP17.76■□□□□ 0.43
SMN1-211ENST00000625245 AHSGP02765 367 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 MAOAP21397 527 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 PGGT1BP53609 377 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 ITGA8P53708 1063 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 RAB8AP61006 207 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 NIPAL1Q6NVV3 410 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 QSOX2Q6ZRP7 698 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 ZNF227Q86WZ6 799 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 RASGEF1CQ8N431 466 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 NT5CQ8TCD5 201 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 UTP15Q8TED0 518 aaKnown RBP17.76■□□□□ 0.43
SMN1-211ENST00000625245 CA5BP1Q8WTZ4 195 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 SLC5A11Q8WWX8 675 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 PBKQ96KB5 322 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 TSNARE1Q96NA8 513 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 VKORC1Q9BQB6 163 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 DEFB126Q9BYW3 111 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 SPNS1Q9H2V7 528 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 ZFP69BQ9UJL9 534 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 ASB1Q9Y576 335 aa17.76■□□□□ 0.43
SMN1-211ENST00000625245 MED13LQ71F56 2210 aa17.75■□□□□ 0.43
SMN1-211ENST00000625245 SAGE2PA6NJ88 616 aa17.75■□□□□ 0.43
SMN1-211ENST00000625245 CDK2AP1O14519 115 aa17.75■□□□□ 0.43
SMN1-211ENST00000625245 TFECO14948 347 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms