RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 LDLRP01130 860 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 IL3P08700 152 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 PTX3P26022 381 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 AQP1P29972 269 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 HSD17B2P37059 387 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 PRKCQQ04759 706 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 ZNF33BQ06732 778 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 NFATC4Q14934 902 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 UBXN2BQ14CS0 331 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 AGERQ15109 404 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 RPE65Q16518 533 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 UAP1L1Q3KQV9 507 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 USP30Q70CQ3 517 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 PTRH1Q86Y79 214 aaKnown RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 LAS2Q8IYD9 372 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 FAM86B1Q8N7N1 296 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 ZNF548Q8NEK5 533 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 OR10G6Q8NH81 332 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 OR5AK3PQ8NH89 298 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 LCN9Q8WX39 176 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 STARD8Q92502 1023 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 C6orf106Q9H6K1 298 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 MRPS30Q9NP92 439 aaKnown RBP9.52□□□□□ -0.89
VTA1-205ENST00000620996 ARMC1Q9NVT9 282 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 AHSPQ9NZD4 102 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 MMP17Q9ULZ9 603 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 DGKBQ9Y6T7 804 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 MYO10Q9HD67 2058 aa9.52□□□□□ -0.89
VTA1-205ENST00000620996 SOCS2O14508 198 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 EML2O95834 649 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 GRK3P35626 688 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 RXRGP48443 463 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 MAPK12P53778 367 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 PPP1R8Q12972 351 aaKnown RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 LRRC32Q14392 662 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 ARHGAP19Q14CB8 494 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 SPATS1Q496A3 300 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 Q6ZSR6 202 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 C16orf78Q8WTQ4 265 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 DNASE1L2Q92874 299 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 GPR174Q9BXC1 333 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 PCBD2Q9H0N5 130 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 EHD1Q9H4M9 534 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 KAT8Q9H7Z6 458 aaKnown RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 FAM120CQ9NX05 1096 aaKnown RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 C5AR2Q9P296 337 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 ACSL6Q9UKU0 697 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 NEUROG3Q9Y4Z2 214 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 NUP214P35658 2090 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 TCRBV5S2A0A599 114 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 FOXE1O00358 373 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 YY2O15391 372 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 PRKD3O94806 890 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 C6orf47O95873 294 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 LYNP07948 512 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 FCGR1AP12314 374 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 CRATP43155 626 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 FOXD4Q12950 439 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 GK3PQ14409 553 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 FBXO43Q4G163 708 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 CMPK2Q5EBM0 449 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 FAM129CQ86XR2 697 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 TICAM1Q8IUC6 712 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 ANKRD53Q8N9V6 530 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 CYGBQ8WWM9 190 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 SLC47A1Q96FL8 570 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 TOE1Q96GM8 510 aaKnown RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 KLHL25Q9H0H3 589 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 REEP4Q9H6H4 257 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 RAPGEFL1Q9UHV5 662 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 PNMA8BQ9ULN7 279 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 PCDHB11Q9Y5F2 797 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 COLEC10Q9Y6Z7 277 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 SERTM1A2A2V5 107 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 PRMT3O60678 531 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 CHI3L1P36222 383 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 HPCAP84074 193 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 ZNF385BQ569K4 471 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 IYDQ6PHW0 289 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 FAM160A2Q8N612 972 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 MAGEE2Q8TD90 523 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 NETO1Q8TDF5 533 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 BMFQ96LC9 184 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 C17orf62Q9BQA9 187 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
VTA1-205ENST00000620996 AASDHPPTQ9NRN7 309 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 ATAD3AQ9NVI7 634 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 SPHK1Q9NYA1 384 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 VPS4AQ9UN37 437 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 ICKQ9UPZ9 632 aa9.51□□□□□ -0.89
VTA1-205ENST00000620996 GSAPA4D1B5 854 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 CREG1O75629 220 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
VTA1-205ENST00000620996 TEAD1P28347 426 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 PIK3CBP42338 1070 aa9.5□□□□□ -0.89
VTA1-205ENST00000620996 SSR2P43308 183 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms