RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 INTS10Q9NVR2 710 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 PDP1Q9P0J1 537 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 HCFC2Q9Y5Z7 792 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 FAM155AB1AL88 458 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 PCDH7O60245 1069 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 UGT2B17O75795 530 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 RSL1D1O76021 490 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF182P17025 639 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 PSMD7P51665 324 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 NCBP2P52298 156 aaKnown RBP eCLIP8□□□□□ -1.13
PTPDC1-204ENST00000620992 EMP3P54852 163 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 CLDN2P57739 230 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 CDC42P60953 191 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 HEPACAMQ14CZ8 416 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PDZK1Q5T2W1 519 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ARHGAP40Q5TG30 622 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C1orf94Q6P1W5 598 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PTCHD4Q6ZW05 846 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 GALNT7Q86SF2 657 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TEX26Q8N6G2 289 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SRFBP1Q8NEF9 429 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 SHDQ96IW2 340 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 LRRC3Q9BY71 257 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PALMDQ9NP74 551 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 CD320Q9NPF0 282 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 RPS6KA6Q9UK32 745 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PCTPQ9UKL6 214 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 EFCAB10A6NFE3 127 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 HIDE1A8MVS5 230 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 H3BMQ9 156 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 IDH3BO43837 385 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PCDHGA12O60330 932 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 NOBOXO60393 691 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 WISP3O95389 354 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 CH25HO95992 272 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PLGP00747 810 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 GIMD1P0DJR0 217 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF24P17028 368 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 IL12AP29459 219 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 MTHFRP42898 656 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 UGT2B15P54855 530 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 LAPTM5Q13571 262 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ODF4Q2M2E3 257 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 DEFB134Q4QY38 66 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 CYBRD1Q53TN4 286 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PRAMEF13Q5VWM6 474 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC30A6Q6NXT4 461 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 OR4N5Q8IXE1 308 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 MDGA1Q8NFP4 955 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PIH1D2Q8WWB5 315 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC13A3Q8WWT9 602 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SMARCD2Q92925 531 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 NKD1Q969G9 470 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 AURKBQ96GD4 344 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 COG8Q96MW5 612 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 GPER1Q99527 375 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM175Q9BSA9 504 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 RDH14Q9HBH5 336 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 COPS7AQ9UBW8 275 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PTBP2Q9UKA9 531 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TPRKBQ9Y3C4 175 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ASPDHA6ND91 283 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 J3QRK9 145 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 K7EPI3 171 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 BTN3A3O00478 584 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ACOX3O15254 700 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 EEDO75530 441 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 RPS17P08708 135 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 CCNOP22674 350 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 IL12BP29460 328 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PTGER1P34995 402 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 RPS14P62263 151 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 CTBSQ01459 385 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 BNC1Q01954 994 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 MXD1Q05195 221 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SELPLGQ14242 412 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PYCR3Q53H96 274 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 LDLRAP1Q5SW96 308 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 OR4F3Q6IEY1 312 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PDE12Q6L8Q7 609 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 RPTNQ6XPR3 784 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TRPV1Q8NER1 839 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 FNDC8Q8TC99 324 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TMBIM1Q969X1 311 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 FBXL8Q96CD0 374 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 BIRC8Q96P09 236 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 PKP4Q99569 1192 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SPATA5L1Q9BVQ7 753 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TTTY10Q9BZA0 68 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 TUBA8Q9NY65 449 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 MRPL39Q9NYK5 338 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF225Q9UK10 706 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 FAM234BA2RU67 622 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 SMAD6O43541 496 aaKnown RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 ATP1B2P14415 290 aaPredicted RBP7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 CCKBRP32239 447 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 HNF1BP35680 557 aa7.99□□□□□ -1.13
PTPDC1-204ENST00000620992 EIF1AXP47813 144 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms