RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ERN1O75460 977 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 LSM8O95777 96 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 RNASE1P07998 156 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 ANXA5P08758 320 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 PFKFB1P16118 471 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 HNF1AP20823 631 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 SYT1P21579 422 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 CA4P22748 312 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 PSMB5P28074 263 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 OPRM1P35372 400 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 ME1P48163 572 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 TRPC1P48995 793 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF143P52747 638 aaPredicted RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 AIF1P55008 147 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 KRT85P78386 507 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 PTPRCAPQ14761 206 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 CR1LQ2VPA4 569 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 PRSS41Q7RTY9 318 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM71AQ8IYT1 594 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF611Q8N823 705 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 MSANTD4Q8NCY6 345 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 ZFAND2BQ8WV99 257 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 SREK1Q8WXA9 508 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 CCDC47Q96A33 483 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 REPS1Q96D71 796 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 MISP3Q96FF7 219 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 TRMT61AQ96FX7 289 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 MCEEQ96PE7 176 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 TRIB1Q96RU8 372 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 RHNO1Q9BSD3 238 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 RAB11FIP5Q9BXF6 653 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 MAGEE1Q9HCI5 957 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 SIX2Q9NPC8 291 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF226Q9NYT6 803 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 C19orf25Q9UFG5 118 aaPredicted RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 DNAJC12Q9UKB3 198 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 LIPT1Q9Y234 373 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 MAGED1Q9Y5V3 778 aaPredicted RBP6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 SCINQ9Y6U3 715 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 YLPM1P49750 1951 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 H0YGG7 62 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 KPNA5O15131 536 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 SRPX2O60687 465 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 CDC123O75794 336 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 YEATS4O95619 227 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 MYL1P05976 194 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 RFPL3SP0C7P2 107 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 ERVK-10P10266 1014 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 DNASE1L1P49184 302 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 ARF3P61204 181 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 ACTN3Q08043 901 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 GALNT2Q10471 571 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 AP1B1Q10567 949 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 FAPQ12884 760 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 SLC10A1Q14973 349 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 LRRC8BQ6P9F7 803 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 RGS9BPQ6ZS82 235 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 ARHGEF39Q8N4T4 335 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 TMEM156Q8N614 296 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 OR10H5Q8NGA6 315 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 HTRA1Q92743 480 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 MSI2Q96DH6 328 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 QRFPRQ96P65 431 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 LPAR4Q99677 370 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 SELENOOQ9BVL4 669 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 ADGRE3Q9BY15 652 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 LIN28AQ9H9Z2 209 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 HCN3Q9P1Z3 774 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 TRHDEQ9UKU6 1024 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 CDC14AQ9UNH5 594 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 ASF1AQ9Y294 204 aa6.28□□□□□ -1.4
SCAMP1-206ENST00000618166 MED12Q93074 2177 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 TCRBV5S1A1TA0A578 114 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 FCHO1O14526 889 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 PRPF4O43172 522 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 HCN1O60741 890 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 TMCC2O75069 709 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 SERPINC1P01008 464 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 PKLRP30613 574 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 PCK1P35558 622 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 CD151P48509 253 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 PRLHRP49683 370 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 ZNF165P49910 485 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 MTTPP55157 894 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 LRRC63Q05C16 580 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 ABRAXAS2Q15018 415 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 BRD3Q15059 726 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 SF1Q15637 639 aaKnown RBP6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 MAN2A1Q16706 1144 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 ZNF750Q32MQ0 723 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 ERMARDQ5T6L9 678 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 NDUFAF5Q5TEU4 345 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 NSUN5P2Q63ZY6 315 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 TMCO3Q6UWJ1 677 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 Q6ZPA2 131 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 RNF44Q7L0R7 432 aa6.27□□□□□ -1.41
SCAMP1-206ENST00000618166 OR9A4Q8NGU2 314 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms