RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	ECI2	O75521	394 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	SNAPC5	O75971	98 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	ESR1	P03372	595 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	IQCF3	P0C7M6	154 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	PRKAR2A	P13861	404 aa	Known RBP	10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	NUP62	P37198	522 aa	Predicted RBP	10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	BLVRA	P53004	296 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	POLR2G	P62487	172 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	PPP3R1	P63098	170 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	ACVR1	Q04771	509 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	MED22	Q15528	200 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	PTCHD3	Q3KNS1	767 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	PLAG1	Q6DJT9	500 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	CFAP77	Q6ZQR2	320 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	METTL3	Q86U44	580 aa	Known RBP	10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	TMEM132C	Q8N3T6	1108 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	FANK1	Q8TC84	345 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	PPP1R3E	Q9H7J1	279 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	ANKRA2	Q9H9E1	313 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	POFUT2	Q9Y2G5	429 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	DERA	Q9Y315	318 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	LSM2	Q9Y333	95 aa	Known RBP	10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	KCNMB2	Q9Y691	235 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958	UNC80	Q8N2C7	3258 aa		10.35	□□□□□ -0.75
CPEB1-215	ENST00000617958		A0A1W2PQL4	384 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	B4GALT5	O43286	388 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	VIP	P01282	170 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	CYP17A1	P05093	508 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	SLC2A2	P11168	524 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	COL6A1	P12109	1028 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	EPHA4	P54764	986 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	TP53BP2	Q13625	1128 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RBBP7	Q16576	425 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	KLHL22	Q53GT1	634 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RYBP	Q8N488	228 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	LRRC52	Q8N7C0	313 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	UCN3	Q969E3	161 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RNF34	Q969K3	372 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	HHIPL1	Q96JK4	782 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	AARSD1	Q9BTE6	412 aa	Known RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	SNTG1	Q9NSN8	517 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	NDRG2	Q9UN36	371 aa	Known RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	SSR3	Q9UNL2	185 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	LIPT1	Q9Y234	373 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	POLR3H	Q9Y535	204 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	PCDHGA2	Q9Y5H1	932 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	CFAP20	Q9Y6A4	193 aa	Known RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	MFSD2B	A6NFX1	497 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	PROS1	P07225	676 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	ANXA3	P12429	323 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	OGN	P20774	298 aa	Known RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	CHRNA4	P43681	627 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RECQL	P46063	649 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	VLDLR	P98155	873 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	NR6A1	Q15406	480 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	AP5B1	Q2VPB7	878 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	FAM174B	Q3ZCQ3	159 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	GPR153	Q6NV75	609 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RTL4	Q6ZR62	310 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	CBLL1	Q75N03	491 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	SRFBP1	Q8NEF9	429 aa	Known RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	B3GNT7	Q8NFL0	401 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RBP7	Q96R05	134 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	TMEM43	Q9BTV4	400 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	REG4	Q9BYZ8	158 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RC3H2	Q9HBD1	1191 aa	Known RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	MCCC2	Q9HCC0	563 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	POLM	Q9NP87	494 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	RDH8	Q9NYR8	311 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	ENOPH1	Q9UHY7	261 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958	SZT2	Q5T011	3432 aa		10.34	□□□□□ -0.75
CPEB1-215	ENST00000617958		A0A1B0GVI7	797 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958		A0A1W2PPL8	197 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	PRSS44	E7EML9	344 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	ACSM4	P0C7M7	580 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	ANXA8	P13928	327 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	SDC2	P34741	201 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	ZNF169	Q14929	603 aa	Predicted RBP	10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	IQCC	Q4KMZ1	466 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	MEDAG	Q5VYS4	303 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	CD276	Q5ZPR3	534 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	EFCAB12	Q6NXP0	572 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	TRIL	Q7L0X0	811 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	BBS7	Q8IWZ6	715 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	ATPAF2	Q8N5M1	289 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	PLA2G15	Q8NCC3	412 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	FUBP1	Q96AE4	644 aa	Known RBP	10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	PRR14	Q9BWN1	585 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	DPY30	Q9C005	99 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	GALNT9	Q9HCQ5	603 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	RAD18	Q9NS91	495 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	TMLHE	Q9NVH6	421 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	NLK	Q9UBE8	527 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	FAM8A1	Q9UBU6	413 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	NCKAP1	Q9Y2A7	1128 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	E2F3	O00716	465 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	FGF18	O76093	207 aa		10.33	□□□□□ -0.76
CPEB1-215	ENST00000617958	ZNF682	O95780	498 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms