RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 STXBP1P61764 594 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 SNRPNP63162 240 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 REEP5Q00765 189 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 RHAGQ02094 409 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 CAV1Q03135 178 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF33BQ06732 778 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 FASTKD3Q14CZ7 662 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 RBBP5Q15291 538 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 MEP1AQ16819 746 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 SFT2D3Q587I9 215 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 PAPD4Q6PIY7 484 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 C3orf62Q6ZUJ4 267 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 LANCL3Q6ZV70 420 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 KLHDC8AQ8IYD2 350 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 LGI4Q8N135 537 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 KRT78Q8N1N4 520 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 TCAIMQ8N3R3 496 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 SPATA4Q8NEY3 305 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 UTP15Q8TED0 518 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 NR4A3Q92570 626 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 MOCOSQ96EN8 888 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 TSNARE1Q96NA8 513 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 CPNE1Q99829 537 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 MCMBPQ9BTE3 642 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 PHACTR1Q9C0D0 580 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 SLC6A16Q9GZN6 736 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 CNOT10Q9H9A5 744 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 OSGIN2Q9Y236 505 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 UTP11Q9Y3A2 253 aaKnown RBP9.11□□□□□ -0.95
TARDBP-218ENST00000617172 CNTRLQ7Z7A1 2325 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 HEATR5BQ9P2D3 2071 aa9.11□□□□□ -0.95
TARDBP-218ENST00000617172 A0A088AWK7 358 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 IGHV3-20A0A0C4DH32 117 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 A1L4Q6 167 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 SYNDIG1LA6NDD5 238 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 NPEPPSL1A6NEC2 478 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF860A6NHJ4 632 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 PSMD12O00232 456 aaPredicted RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF888P0CJ79 500 aaPredicted RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 SMIM10L1P0DMW3 83 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 C1GALT1C1LP0DN25 315 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 RNH1P13489 461 aaKnown RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF10P21506 573 aaPredicted RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 GGT5P36269 586 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 OR4D2P58180 307 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 ATP6V0D1P61421 351 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 USP10Q14694 798 aaKnown RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 TGFBIQ15582 683 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 TMIGD1Q6UXZ0 262 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 QSOX2Q6ZRP7 698 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 TMPRSS11BQ86T26 416 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 GPSM1Q86YR5 675 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 CEP97Q8IW35 865 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 ANKRD53Q8N9V6 530 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 OR5T3Q8NGG3 340 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 RELTQ969Z4 430 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 RHBDF1Q96CC6 855 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 SMIM10Q96HG1 83 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 FAR2Q96K12 515 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 PTCHD1Q96NR3 888 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 TAAR6Q96RI8 345 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 UTP23Q9BRU9 249 aaKnown RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 EHD1Q9H4M9 534 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 NT5DC2Q9H857 520 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 GPRC5BQ9NZH0 403 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 SPTAN1Q13813 2472 aaKnown RBP9.1□□□□□ -0.95
TARDBP-218ENST00000617172 POLEQ07864 2286 aa9.1□□□□□ -0.95
TARDBP-218ENST00000617172 OR2W5A6NFC9 320 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 ANKDD1BA6NHY2 528 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 CLDN4O14493 209 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 B4GALT2O60909 372 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 CDC123O75794 336 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-218ENST00000617172 WDR47O94967 919 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 F10P00742 488 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 CCDC166P0CW27 439 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 RNF224P0DH78 156 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 CD46P15529 392 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 STMN1P16949 149 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SSTR1P30872 391 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 CASQ1P31415 396 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SPRP35270 261 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-218ENST00000617172 GP5P40197 560 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SLC6A12P48065 614 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 TDGF1P3P51864 188 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SLC26A5P58743 744 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 RBPJQ06330 500 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 TUBA3CQ13748 450 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 RCN2Q14257 317 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF460Q14592 562 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 TSNQ15631 228 aaKnown RBP9.09□□□□□ -0.95
TARDBP-218ENST00000617172 KRTCAP3Q53RY4 240 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 ZNF766Q5HY98 468 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SULT1C3Q6IMI6 304 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 TUBA3EQ6PEY2 450 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 GFRALQ6UXV0 394 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SLCO4C1Q6ZQN7 724 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SLC34A3Q8N130 599 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms