RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 MAP4K5Q9Y4K4 846 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 RAI2Q9Y5P3 530 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 MGAMO43451 1857 aa6.44□□□□□ -1.38
LMO3-235ENST00000616247 DNAH12Q6ZR08 3092 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 FADS2P1A8MWK0 482 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TEX46H3BTG2 121 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 M0QZ92 97 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 PCDH17O14917 1159 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ENTPD6O75354 484 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TSPAN12O95859 305 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 PEX11BO96011 259 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TRBC1P01850 177 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 HIST1H2AGP0C0S8 130 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 IRF1P10914 325 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 KCNE1P15382 129 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 HIST1H2ADP20671 130 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SDC2P34741 201 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ATP6V1E1P36543 226 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 BEX3Q00994 111 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 RPL6Q02878 288 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 RPA4Q13156 261 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 BOP1Q14137 746 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 LRRC32Q14392 662 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 NCF4Q15080 339 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZMYND11Q15326 602 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZNF79Q15937 498 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ANKRD54Q6NXT1 300 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 FAM180BQ6P0A1 224 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ALKAL1Q6UXT8 129 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 CHMP1BQ7LBR1 199 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZNF367Q7RTV3 350 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TMEM86AQ8N2M4 240 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 CELF5Q8N6W0 485 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 LRRC17Q8N6Y2 441 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 PPTC7Q8NI37 304 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SETD6Q8TBK2 473 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 AKAP1Q92667 903 aaKnown RBP eCLIP6.43□□□□□ -1.38
LMO3-235ENST00000616247 UPF1Q92900 1129 aaKnown RBP eCLIP6.43□□□□□ -1.38
LMO3-235ENST00000616247 RIT1Q92963 219 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 FBXO32Q969P5 355 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZBED3Q96IU2 234 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 HIST1H2AHQ96KK5 128 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 HIST1H2AJQ99878 128 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 H2AFJQ9BTM1 129 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ANKRA2Q9H9E1 313 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 CTPS2Q9NRF8 586 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 NLE1Q9NVX2 485 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 NKIRAS2Q9NYR9 191 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZNF226Q9NYT6 803 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TVP23BQ9NYZ1 205 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 PPT2Q9UMR5 302 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 BPTFQ12830 3046 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 WDR81Q562E7 1941 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 MGAT4DA6NG13 374 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 RRN3P2A6NIE6 340 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 WASHC1A8K0Z3 465 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ATP6V1G2-DDX39BF2Z307 99 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 OR10H3O60404 316 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 GPR32O75388 356 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 KCNK5O95279 499 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 MYCP01106 439 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 IGFBP1P08833 259 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 CSF3P09919 207 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 LAMP1P11279 417 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZNF7P17097 686 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 SDC1P18827 310 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 PKLRP30613 574 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 EVI2BP34910 448 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SUOXP51687 545 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SMSP52788 366 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 RPS24P62847 133 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.43□□□□□ -1.38
LMO3-235ENST00000616247 IL10RBQ08334 325 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ACSM2AQ08AH3 577 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SUZ12Q15022 739 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 KIAA0040Q15053 153 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 PTGES3Q15185 160 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 RAB41Q5JT25 222 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SAXO2Q658L1 398 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ACSM2BQ68CK6 577 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 B3GLCTQ6Y288 498 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 SERPINA9Q86WD7 417 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 APOBEC3FQ8IUX4 373 aaKnown RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 NAGSQ8N159 534 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 UMODL1-AS1Q8N2C9 162 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 DNAJC5GQ8N7S2 189 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TCEANCQ8N8B7 351 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 ATAD1Q8NBU5 361 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 VPS37AQ8NEZ2 397 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 OR4K1Q8NGD4 311 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 MAGEB10Q96LZ2 347 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 SEPT5Q99719 369 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 SRRQ9GZT4 340 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 RACGAP1Q9H0H5 632 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 MED28Q9H204 178 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 CLEC4MQ9H2X3 399 aaPredicted RBP6.43□□□□□ -1.38
LMO3-235ENST00000616247 ZNF408Q9H9D4 720 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 TBC1D17Q9HA65 648 aa6.43□□□□□ -1.38
LMO3-235ENST00000616247 OSER1Q9NX31 292 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms