RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 COL9A1P20849 921 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 UQCRC1P31930 480 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 HMGCLP35914 325 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 UGT2B10P36537 528 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 RPS5P46782 204 aaKnown RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 GNPDA1P46926 289 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 STARD6P59095 220 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 RHAGQ02094 409 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 NFYCQ13952 458 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ARHGEF7Q14155 803 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 Q5BKY6 102 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 LRRC66Q68CR7 880 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ANKS6Q68DC2 871 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 LETMD1Q6P1Q0 360 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 SPATA19Q7Z5L4 167 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 RORBQ92753 470 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 CCDC120Q96HB5 630 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 FOXQ1Q9C009 403 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 DERL2Q9GZP9 239 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 LTB4R2Q9NPC1 389 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 FBXL12Q9NXK8 326 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TAS2R9Q9NYW1 312 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 RIMKLBQ9ULI2 386 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 SNX7Q9UNH6 387 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 PCDHA9Q9Y5H5 950 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 KCNE2Q9Y6J6 123 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 FAM170BA6NMN3 283 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 H0Y858 1186 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 MEN1O00255 615 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 MED26O95402 600 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ADH1BP00325 375 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 UMPSP11172 480 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 CYP2A6P11509 494 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 PSKH1P11801 424 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 FMO4P31512 558 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF140P52738 457 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 KCNK10P57789 538 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 VBP1P61758 197 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 GPR50Q13585 617 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 LRRC32Q14392 662 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 DPY19L1Q2PZI1 675 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 COLEC12Q5KU26 742 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 PAQR3Q6TCH7 311 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF517Q6ZMY9 492 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 CREB3L2Q70SY1 520 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ERN2Q76MJ5 926 aaKnown RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 HID1Q8IV36 788 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 FAM83FQ8NEG4 500 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 FLCNQ8NFG4 579 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 SETD6Q8TBK2 473 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TSPEARQ8WU66 669 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 EID2BQ96D98 161 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 AURKBQ96GD4 344 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 CDKN2AIPNLQ96HQ2 116 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 ZNF578Q96N58 590 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TRIM54Q9BYV2 358 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 REXO4Q9GZR2 422 aaKnown RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 SLC6A17Q9H1V8 727 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 PRDM8Q9NQV8 689 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 NLE1Q9NVX2 485 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TAS2R13Q9NYV9 303 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 TEKT2Q9UIF3 430 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 MKLN1Q9UL63 735 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 MMP17Q9ULZ9 603 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 BTBD3Q9Y2F9 522 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 GPR45Q9Y5Y3 372 aa12.6□□□□□ -0.39
FOXN3-219ENST00000615335 A0A1B0GTL3 188 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 PNMA8CA0A1B0GUJ8 204 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 SEMA3DO95025 777 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 PRSS56P0CW18 603 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 ADRB3P13945 408 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 ALOX12P18054 663 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 LHCGRP22888 699 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 DIO3P55073 304 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 RPS14P62263 151 aaKnown RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 CDKN3Q16667 212 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 RAB43Q86YS6 212 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 LINC00518Q8N0U6 118 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 PAPD5Q8NDF8 572 aaKnown RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 NCLNQ969V3 563 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 TMEM125Q96AQ2 219 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 DACT3Q96B18 629 aaPredicted RBP12.59□□□□□ -0.39
FOXN3-219ENST00000615335 NELL2Q99435 816 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 BDH2Q9BUT1 245 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 FBRSQ9HAH7 460 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 SLC52A3Q9NQ40 469 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 A0A1W2PP18 115 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 PCP4L1A6NKN8 68 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 HPRP00739 348 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 DNTTP04053 509 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 C5AR1P21730 350 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 OXTRP30559 389 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 VIPR1P32241 457 aa12.59□□□□□ -0.39
FOXN3-219ENST00000615335 P2RY2P41231 377 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms