RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 WNT9AO14904 365 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 RAMP2O60895 175 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 CDH4P55283 916 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 RPP38P78345 283 aaKnown RBP21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 GPLD1P80108 840 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 IL1RL1Q01638 556 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 NPRL3Q12980 569 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 CDONQ4KMG0 1287 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 CCDC71Q8IV32 467 aaPredicted RBP21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC38A6Q8IZM9 456 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 OR8H2Q8N162 312 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 CADM2Q8N3J6 435 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 LSMEM1Q8N8F7 131 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 PNPLA1Q8N8W4 532 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 C9orf43Q8TAL5 461 aaPredicted RBP21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 HMCESQ96FZ2 354 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 KIF17Q9P2E2 1029 aa21.14■□□□□ 0.97
POLR2J3-220ENST00000613744 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 LOC285095A0A1B0GVY8 99 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 CLCA1A8K7I4 914 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 NARSO43776 548 aaKnown RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 NCF1P14598 390 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 TYRP14679 529 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 CD9P21926 228 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 HOXD9P28356 352 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 HTR2BP41595 481 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 RGS6P49758 472 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 ERVPABLB-1P60509 514 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 ABHD18Q0P651 414 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 ZNF177Q13360 481 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 C5orf22Q49AR2 442 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 MPPE1Q53F39 396 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 SIRPB2Q5JXA9 342 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 LRIF1Q5T3J3 769 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 C19orf48Q6RUI8 117 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 IL27RAQ6UWB1 636 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 ZNF367Q7RTV3 350 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC51BQ86UW2 128 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 RNF130Q86XS8 419 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 KRT73Q86Y46 540 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 TCAIMQ8N3R3 496 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 DNAJC22Q8N4W6 341 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 HJURPQ8NCD3 748 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 OTUB2Q96DC9 234 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 TRIM39Q9HCM9 518 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 PDP1Q9P0J1 537 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A1B0GVM2 712 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 LOC730098B7Z3J9 87 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 AP3D1O14617 1153 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 STX7O15400 261 aaKnown RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 PEX11BO96011 259 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 ALPPP05187 535 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 GRK5P34947 590 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 CD86P42081 329 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 AGTR2P50052 363 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 Q5BKY6 102 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 UMODL1-AS1Q8N2C9 162 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 METTL6Q8TCB7 284 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 WDFY2Q96P53 400 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 BARD1Q99728 777 aaKnown RBP21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 NIPAL2Q9H841 368 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 SPASTQ9UBP0 616 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 KLHL21Q9UJP4 597 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 IKZF3Q9UKT9 509 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 MAN2B2Q9Y2E5 1009 aa21.13■□□□□ 0.97
POLR2J3-220ENST00000613744 DOCK4Q8N1I0 1966 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A0D9SEW6 157 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 LOC100506127A0A0U1RQW1 187 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC35F4A4IF30 521 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 CDC7O00311 574 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 ZNF780AO75290 641 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 CLDN11O75508 207 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 MMP2P08253 660 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 ADH5P11766 374 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 ACVRL1P37023 503 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 SOX9P48436 509 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 MAPKAPK2P49137 400 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 ZP2Q05996 745 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 RUNX3Q13761 415 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 GTF2H3Q13889 308 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 GCNT7Q6ZNI0 430 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 OR4L1Q8NH43 312 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 NEDD4LQ96PU5 975 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 COQ7Q99807 217 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 DPY30Q9C005 99 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC22A4Q9H015 551 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 OR51E2Q9H255 320 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 RASSF1Q9NS23 344 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 C14orf119Q9NWQ9 140 aa21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 KIF26AQ9ULI4 1882 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A096LPI6 279 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 NFATC1O95644 943 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 SEMG1P04279 462 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 PGRP06401 933 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 ATXN1LP0C7T5 689 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 POLR2CP19387 275 aaPredicted RBP21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 HLA-DMAP28067 261 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 TNFSF8P32971 234 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 ASAH1Q13510 395 aa21.11■□□□□ 0.97
POLR2J3-220ENST00000613744 IRF3Q14653 427 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms