RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 R3HCC1LQ7Z5L2 792 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 UBE3DQ7Z6J8 389 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 TRIM73Q86UV7 250 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 ANKRD46Q86W74 232 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 SH3GL1Q99961 368 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 DUSP26Q9BV47 211 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 PAIP1Q9H074 479 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 ALG2Q9H553 416 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 S100A14Q9HCY8 104 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 ANKMY1Q9P2S6 941 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 STX18Q9P2W9 335 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 ADAM29Q9UKF5 820 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 WBP11Q9Y2W2 641 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 NEUROG3Q9Y4Z2 214 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 SPAG17Q6Q759 2223 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 CEP192Q8TEP8 1941 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 RTCAO00442 366 aaKnown RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 MAGP20916 626 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 TRPC1P48995 793 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 MAZP56270 477 aaKnown RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 LIPEQ05469 1076 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 C2orf80Q0P641 193 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 BNIP2Q12982 314 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 TEAD4Q15561 434 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ADPRMQ3LIE5 342 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ANKRD26P1Q6NSI1 321 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 SPESP1Q6UW49 350 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ARL14Q8N4G2 192 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 BHLHE22Q8NFJ8 381 aaPredicted RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 NELL1Q92832 810 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ZUFSPQ96AP4 578 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 LHX9Q9NQ69 397 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 SLC25A37Q9NYZ2 338 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 GMPR2Q9P2T1 348 aaKnown RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 PCDHB14Q9Y5E9 798 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 KLK4Q9Y5K2 254 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 TRBV5-3A0A0A0MS03 114 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 PRSS51A0A1B0GVH4 220 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ARHGAP10A1A4S6 786 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 RFXANKO14593 260 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 GSK3BP49841 420 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 MAPK12P53778 367 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 HYAL2Q12891 473 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 DUOXA1Q1HG43 343 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 RUNDC3AQ59EK9 446 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 TJAP1Q5JTD0 557 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ANXA8L1Q5VT79 327 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 LYSMD4Q5XG99 296 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 OR4C11Q6IEV9 310 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 FBXO42Q6P3S6 717 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 FIGLAQ6QHK4 219 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 C11orf74Q86VG3 221 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 OOSP2Q86WS3 158 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 NUDT13Q86X67 352 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ZNF761Q86XN6 746 aaPredicted RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 MSRB3Q8IXL7 192 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 VPS37AQ8NEZ2 397 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 MTERF3Q96E29 417 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 INPP5KQ9BT40 448 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 DDX31Q9H8H2 851 aaKnown RBP20.6■□□□□ 0.89
USP6NL-204ENST00000606752 ERVMER34-1Q9H9K5 563 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 SH3BP4Q9P0V3 963 aa20.6■□□□□ 0.89
USP6NL-204ENST00000606752 OR5K3A6NET4 321 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 PPM1DO15297 605 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 DNAJA2O60884 412 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 PIAS2O75928 621 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 STAMBPO95630 424 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 B3GALT4O96024 378 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 ANXA6P08133 673 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 FURINP09958 794 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 PTPN6P29350 595 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 ARFIP1P53367 373 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 ATXN3P54252 364 aaPredicted RBP20.59■□□□□ 0.89
USP6NL-204ENST00000606752 MTPNP58546 118 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 RELAQ04206 551 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 CYP4F3Q08477 520 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 PDE7AQ13946 482 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 OGFOD3Q6PK18 319 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 DNAJC14Q6Y2X3 702 aaPredicted RBP20.59■□□□□ 0.89
USP6NL-204ENST00000606752 C17orf82Q86X59 251 aaPredicted RBP20.59■□□□□ 0.89
USP6NL-204ENST00000606752 PYDC1Q8WXC3 89 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 GBP5Q96PP8 586 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 KCTD14Q9BQ13 255 aaPredicted RBP20.59■□□□□ 0.89
USP6NL-204ENST00000606752 AICDAQ9GZX7 198 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 UCK1Q9HA47 277 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 ATAD3AQ9NVI7 634 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 AP3M1Q9Y2T2 418 aa20.59■□□□□ 0.89
USP6NL-204ENST00000606752 A0A1B0GVT2 93 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 NOBOXO60393 691 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 GSTM5P46439 218 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 DHPSP49366 369 aaPredicted RBP20.58■□□□□ 0.89
USP6NL-204ENST00000606752 PLA2G16P53816 162 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 MC1RQ01726 317 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 CSTF1Q05048 431 aaKnown RBP20.58■□□□□ 0.89
USP6NL-204ENST00000606752 SLC34A1Q06495 639 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 SELPLGQ14242 412 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 ARMC6Q6NXE6 501 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 DHFR2Q86XF0 187 aa20.58■□□□□ 0.89
USP6NL-204ENST00000606752 C1orf210Q8IVY1 113 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms