RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 ACVR1Q04771 509 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 LARS2Q15031 903 aaKnown RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 SLC35F1Q5T1Q4 408 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 ZNF57Q68EA5 555 aaPredicted RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 PLEKHM3Q6ZWE6 761 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 TSEN54Q7Z6J9 526 aaKnown RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 NAGSQ8N159 534 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 SLC37A3Q8NCC5 494 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 PIH1D2Q8WWB5 315 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 C7orf34Q96L11 122 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 TM9SF2Q99805 663 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 NUDT4Q9NZJ9 180 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 ZNF222Q9UK12 451 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 ADAMDEC1O15204 470 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 FABP7O15540 132 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 EPB42P16452 691 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 POLR2CP19387 275 aaPredicted RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 PSMA1P25786 263 aaKnown RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 ITGA1P56199 1179 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 RAB8AP61006 207 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 DBPQ10586 325 aaPredicted RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 FBXO43Q4G163 708 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 TOR1AIP1Q5JTV8 583 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 MEX3DQ86XN8 651 aaKnown RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 SPATA2LQ8IUW3 424 aaPredicted RBP14.87□□□□□ -0.03
RER1-209ENST00000605895 SYT12Q8IV01 421 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 GHDCQ8N2G8 530 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 RIT1Q92963 219 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 UPRTQ96BW1 309 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 REPS1Q96D71 796 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 C1GALT1C1Q96EU7 318 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 NDUFAF4Q9P032 175 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 RWDD3Q9Y3V2 267 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 PCDHGB3Q9Y5G1 929 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 PCDHGA2Q9Y5H1 932 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 KLK4Q9Y5K2 254 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 PTCH2Q9Y6C5 1203 aa14.87□□□□□ -0.03
RER1-209ENST00000605895 GTPBP1O00178 669 aaKnown RBP14.86□□□□□ -0.03
RER1-209ENST00000605895 SLC28A1O00337 649 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 TNNI3P19429 210 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 HOXC13P31276 330 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 INPP1P49441 399 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 OLR1P78380 273 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 TARDBPQ13148 414 aaKnown RBP eCLIP14.86□□□□□ -0.039e-7■■■■□ 21
RER1-209ENST00000605895 SERINC3Q13530 473 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 TRIQKQ629K1 86 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 FRMPD2BQ6IN97 320 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 DNAJC5GQ8N7S2 189 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 POF1BQ8WVV4 589 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 ZBED6CLQ96FA7 236 aaPredicted RBP14.86□□□□□ -0.03
RER1-209ENST00000605895 FAM129BQ96TA1 746 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 ATG10Q9H0Y0 220 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 ZNF556Q9HAH1 456 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 TPT1P8Q9HAU6 139 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 BEX1Q9HBH7 125 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 ACSL6Q9UKU0 697 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 TRIP12Q14669 1992 aaPredicted RBP14.86□□□□□ -0.03
RER1-209ENST00000605895 PDCD11Q14690 1871 aaKnown RBP14.86□□□□□ -0.03
RER1-209ENST00000605895 ISM1B1AKI9 464 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 CCNB2O95067 398 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 SLC2A2P11168 524 aaPredicted RBP14.86□□□□□ -0.03
RER1-209ENST00000605895 RHOQP17081 205 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 LPOP22079 712 aaPredicted RBP14.86□□□□□ -0.03
RER1-209ENST00000605895 PBX3P40426 434 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 IL18Q14116 193 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 FGFBP1Q14512 234 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 INSL4Q14641 139 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 C10orf120Q5SQS8 335 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 ADNP2Q6IQ32 1131 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 ZNF852Q6ZMS4 543 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 IDO2Q6ZQW0 420 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 CBLL1Q75N03 491 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 SHFQ7M4L6 423 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 PLPP6Q8IY26 295 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 OR5AK3PQ8NH89 298 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 C17orf62Q9BQA9 187 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 SCML1Q9UN30 329 aa14.86□□□□□ -0.03
RER1-209ENST00000605895 TRAV6A0A075B6T7 132 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 H3BN98 237 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 TPST2O60704 377 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 MMP3P08254 477 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 HOXB8P17481 243 aaPredicted RBP14.85□□□□□ -0.03
RER1-209ENST00000605895 ETV6P41212 452 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 PDZD3Q86UT5 571 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 Q8N402 240 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 AQP11Q8NBQ7 271 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 GALNT11Q8NCW6 608 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 SETD6Q8TBK2 473 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 DPCDQ9BVM2 203 aaPredicted RBP14.85□□□□□ -0.03
RER1-209ENST00000605895 CINPQ9BW66 212 aaPredicted RBP14.85□□□□□ -0.03
RER1-209ENST00000605895 ING3Q9NXR8 418 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 SH3BP4Q9P0V3 963 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 LTBP3Q9NS15 1303 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 CSO75390 466 aaKnown RBP14.85□□□□□ -0.03
RER1-209ENST00000605895 TOXO94900 526 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 FCER2P06734 321 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 ETFAP13804 333 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 CCT3P49368 545 aaKnown RBP14.85□□□□□ -0.03
RER1-209ENST00000605895 TTPAP49638 278 aa14.85□□□□□ -0.03
RER1-209ENST00000605895 PTPN5P54829 565 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms