RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	ZNF778	Q96MU6	729 aa		11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	PTCHD1	Q96NR3	888 aa		11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	CHP1	Q99653	195 aa		11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	EXO5	Q9H790	373 aa		11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	CBLC	Q9ULV8	474 aa		11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	SCN3A	Q9NY46	2000 aa		11.46	□□□□□ -0.57
NUP62-223	ENST00000601665	TRBV11-1	A0A0K0K1C0	115 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	SAGE2P	A6NJ88	616 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	ERI2	A8K979	691 aa	Known RBP	11.45	□□□□□ -0.58
NUP62-223	ENST00000601665		E7ENX8	843 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	PFDN6	O15212	129 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	B4GALT2	O60909	372 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	ITGA10	O75578	1167 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	SLC16A8	O95907	504 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	SLC35G6	P0C7Q6	338 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	CHRM3	P20309	590 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	RPS3	P23396	243 aa	Known RBP eCLIP	11.45	□□□□□ -0.58	1e-7	■□□□□ 10.8
NUP62-223	ENST00000601665	ATP5D	P30049	168 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	FMO4	P31512	558 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	GRK3	P35626	688 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	ADH7	P40394	386 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	SSR4	P51571	173 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	DCAF7	P61962	342 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	TAP2	Q03519	686 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	ACVR1	Q04771	509 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	TRIM14	Q14142	442 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	HERC3	Q15034	1050 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	C1orf185	Q5T7R7	199 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	WLS	Q5T9L3	541 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	C11orf63	Q6NUN7	778 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	CLEC17A	Q6ZS10	378 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	ASPG	Q86U10	573 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	LUZP1	Q86V48	1076 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	PDSS2	Q86YH6	399 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	MPP5	Q8N3R9	675 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	KCT2	Q8NC54	265 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	PSD4	Q8NDX1	1056 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	ZNF480	Q8WV37	535 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	SLC13A3	Q8WWT9	602 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	SLCO2A1	Q92959	643 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	THAP11	Q96EK4	314 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	P2RY12	Q9H244	342 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	LDAH	Q9H6V9	325 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	LANCL2	Q9NS86	450 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	TMEM184C	Q9NVA4	438 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	KCMF1	Q9P0J7	381 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	TCAF1	Q9Y4C2	921 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	FAM215A	Q9Y5M1	114 aa		11.45	□□□□□ -0.58
NUP62-223	ENST00000601665	MXRA5	Q9NR99	2828 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	KCNE1B	A0A087WTH5	132 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665		A8MUA0	341 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665		A8MVJ9	347 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665		E5RI56	91 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665		H3BMM5	538 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	PSMD12	O00232	456 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	SYT5	O00445	386 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	DVL2	O14641	736 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	PSIP1	O75475	530 aa	Known RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	TACR1	P25103	407 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	PTPN7	P35236	360 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	MAN2A2	P49641	1150 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	CLCN2	P51788	898 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	NR0B1	P51843	470 aa	Known RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	HADHB	P55084	474 aa	Known RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	HYAL2	Q12891	473 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	KLHL38	Q2WGJ6	581 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	NDUFAF5	Q5TEU4	345 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	GK5	Q6ZS86	529 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	P3H2	Q8IVL5	708 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	OR5T3	Q8NGG3	340 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	PEX13	Q92968	403 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	SARAF	Q96BY9	339 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	CCDC77	Q9BR77	488 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	YIPF4	Q9BSR8	244 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	FAM129A	Q9BZQ8	928 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	BEX4	Q9NWD9	120 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	HPF1	Q9NWY4	346 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	MTRF1L	Q9UGC7	380 aa	Known RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	DRG1	Q9Y295	367 aa	Known RBP	11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	PCDHA3	Q9Y5H8	950 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	SLC22A7	Q9Y694	548 aa		11.44	□□□□□ -0.58
NUP62-223	ENST00000601665	TUBAL3	A6NHL2	446 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	HSPB2	A8KAH6	182 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	SMAD7	O15105	426 aa	Known RBP	11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	NIPSNAP2	O75323	286 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	BMP5	P22003	454 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	CTNNA1	P35221	906 aa	Known RBP	11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	MAGEA1	P43355	309 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	ASCL1	P50553	236 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	RWDD2B	P57060	319 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	OLR1	P78380	273 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	DAZAP2	Q15038	168 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	HSPB2	Q16082	182 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	CTSL3P	Q5NE16	218 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	RNF187	Q5TA31	235 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	RIPPLY2	Q5TAB7	128 aa		11.43	□□□□□ -0.58
NUP62-223	ENST00000601665	RTL6	Q6ICC9	239 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms