RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 ZNF781Q8N8C0 355 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 TTC29Q8NA56 475 aaPredicted RBP13.92□□□□□ -0.18
RAB11B-204ENST00000600719 UTP15Q8TED0 518 aaKnown RBP13.92□□□□□ -0.18
RAB11B-204ENST00000600719 MTFMTQ96DP5 389 aaKnown RBP13.92□□□□□ -0.18
RAB11B-204ENST00000600719 CMTM7Q96FZ5 175 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 NDC1Q9BTX1 674 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 ULBP3Q9BZM4 244 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 BRF2Q9HAW0 419 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 IRAK4Q9NWZ3 460 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 DNAJC15Q9Y5T4 150 aa13.92□□□□□ -0.18
RAB11B-204ENST00000600719 DSCR3O14972 297 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 FOXS1O43638 330 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 CPNE3O75131 537 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 ONECUT2O95948 504 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TGFB1P01137 390 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 HBQ1P09105 142 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 ITGAXP20702 1163 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 PTX3P26022 381 aaPredicted RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 STXBP1P61764 594 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 CUL3Q13618 768 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 DDX39BQ13838 428 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 COL9A2Q14055 689 aaPredicted RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 MUM1Q2TAK8 710 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TMEM35AQ53FP2 167 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 SGO1Q5FBB7 561 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TOR1AIP1Q5JTV8 583 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 DEPDC1Q5TB30 811 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 KHDRBS2Q5VWX1 349 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TTLL10Q6ZVT0 673 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TIPARPQ7Z3E1 657 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TRIM46Q7Z4K8 759 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 UBE3DQ7Z6J8 389 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 DTWD1Q8N5C7 304 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 OR2L5Q8NG80 312 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 FAM76AQ8TAV0 307 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 DYDC1Q8WWB3 177 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 SELENOMQ8WWX9 145 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 GATA6Q92908 595 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 RNF31Q96EP0 1072 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 MVB12AQ96EY5 273 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 ZNF578Q96N58 590 aaPredicted RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 GBP5Q96PP8 586 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 F2RL3Q96RI0 385 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 REXO4Q9GZR2 422 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 ILKAPQ9H0C8 392 aaPredicted RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 OR51B5Q9H339 312 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 TUBB1Q9H4B7 451 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 DHCR7Q9UBM7 475 aaKnown RBP13.91□□□□□ -0.18
RAB11B-204ENST00000600719 ANGPTL2Q9UKU9 493 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 AK5Q9Y6K8 562 aa13.91□□□□□ -0.18
RAB11B-204ENST00000600719 A0A1B0GX78 115 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CRCPO75575 148 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CAPNS1P04632 268 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 ZNF888P0CJ79 500 aaPredicted RBP13.9□□□□□ -0.18
RAB11B-204ENST00000600719 HSD3B1P14060 373 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 ALOX12P18054 663 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 HSD3B2P26439 372 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CD82P27701 267 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 RPL14P50914 215 aaKnown RBP13.9□□□□□ -0.18
RAB11B-204ENST00000600719 PHEXP78562 749 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CSTF3Q12996 717 aaKnown RBP13.9□□□□□ -0.18
RAB11B-204ENST00000600719 MAP7Q14244 749 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 HERC3Q15034 1050 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 NDUFA9Q16795 377 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 TBC1D25Q3MII6 688 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 ABHD17CQ6PCB6 329 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CHSY3Q70JA7 882 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 PRSS41Q7RTY9 318 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 DTX1Q86Y01 620 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 PDSS2Q86YH6 399 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 HOMEZQ8IX15 550 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 DSELQ8IZU8 1212 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 GBP7Q8N8V2 638 aaPredicted RBP13.9□□□□□ -0.18
RAB11B-204ENST00000600719 PROKR1Q8TCW9 393 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 AGR3Q8TD06 166 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 LRRC8CQ8TDW0 803 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CCT6BQ92526 530 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 GAL3ST3Q96A11 431 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CLIP3Q96DZ5 547 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 QRFPRQ96P65 431 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 HBEGFQ99075 208 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 ZNF717Q9BY31 904 aaPredicted RBP13.9□□□□□ -0.18
RAB11B-204ENST00000600719 ACPTQ9BZG2 426 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 LHX9Q9NQ69 397 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 PRDM7Q9NQW5 492 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 THSD1Q9NS62 852 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 DKK4Q9UBT3 224 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 CCL27Q9Y4X3 112 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 SDK2Q58EX2 2172 aa13.9□□□□□ -0.18
RAB11B-204ENST00000600719 FRYQ5TBA9 3013 aa13.89□□□□□ -0.19
RAB11B-204ENST00000600719 TEX51A0A1B0GUA7 166 aa13.89□□□□□ -0.19
RAB11B-204ENST00000600719 URADA6NGE7 173 aa13.89□□□□□ -0.19
RAB11B-204ENST00000600719 MEN1O00255 615 aa13.89□□□□□ -0.19
RAB11B-204ENST00000600719 ERI3O43414 337 aaKnown RBP13.89□□□□□ -0.19
RAB11B-204ENST00000600719 GALR3O60755 368 aaPredicted RBP13.89□□□□□ -0.19
RAB11B-204ENST00000600719 SEMA3DO95025 777 aa13.89□□□□□ -0.19
RAB11B-204ENST00000600719 NSA2O95478 260 aaKnown RBP13.89□□□□□ -0.19
RAB11B-204ENST00000600719 ALAS2P22557 587 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms