RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FRA10AC1Q70Z53 315 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 MAMDC2Q7Z304 686 aaPredicted RBP14.88□□□□□ -0.03
VRK3-221ENST00000600284 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SHISA5Q8N114 240 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 ANKRD53Q8N9V6 530 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 TTLQ8NG68 377 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 OR5T3Q8NGG3 340 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 UTP15Q8TED0 518 aaKnown RBP14.88□□□□□ -0.03
VRK3-221ENST00000600284 ANKRD49Q8WVL7 239 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 RHBDF1Q96CC6 855 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 TSPAN17Q96FV3 270 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SMIM10Q96HG1 83 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 MAGEB10Q96LZ2 347 aaPredicted RBP14.88□□□□□ -0.03
VRK3-221ENST00000600284 TSNARE1Q96NA8 513 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 CAPS2Q9BXY5 557 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 DERL2Q9GZP9 239 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 SPNS1Q9H2V7 528 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 ABI3Q9P2A4 366 aa14.88□□□□□ -0.03
VRK3-221ENST00000600284 OR2W5A6NFC9 320 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 A8MUI8 341 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 H2AFYO75367 372 aaKnown RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 RASAL1O95294 804 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 WISP3O95389 354 aaPredicted RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 CRYABP02511 175 aaKnown RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 STSP08842 583 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 ZNF888P0CJ79 500 aaPredicted RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 GSTM2P28161 218 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 SLC6A12P48065 614 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 PER3P56645 1201 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 RBBP5Q15291 538 aaKnown RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 TSNQ15631 228 aaKnown RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 MEP1AQ16819 746 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 ACER2Q5QJU3 275 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 PAPD4Q6PIY7 484 aaKnown RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 TMPRSS11BQ86T26 416 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 TCAIMQ8N3R3 496 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 CREB3L4Q8TEY5 395 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 NR4A3Q92570 626 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 SEC16BQ96JE7 1060 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 TAAR6Q96RI8 345 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 CPNE1Q99829 537 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 PHACTR1Q9C0D0 580 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 PITHD1Q9GZP4 211 aaPredicted RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 KCNK13Q9HB14 408 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 SAYSD1Q9NPB0 183 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 SMYD2Q9NRG4 433 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 TXNDC16Q9P2K2 825 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 OSGIN2Q9Y236 505 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 MTO1Q9Y2Z2 717 aaKnown RBP14.87□□□□□ -0.03
VRK3-221ENST00000600284 SCN3AQ9NY46 2000 aa14.87□□□□□ -0.03
VRK3-221ENST00000600284 ZNF860A6NHJ4 632 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 CDC123O75794 336 aaPredicted RBP14.86□□□□□ -0.03
VRK3-221ENST00000600284 C1GALT1C1LP0DN25 315 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 SSTR1P30872 391 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 GGT5P36269 586 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 TDGF1P3P51864 188 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 OR4D2P58180 307 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 STXBP1P61764 594 aaKnown RBP14.86□□□□□ -0.03
VRK3-221ENST00000600284 CAV1Q03135 178 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 HYAL2Q12891 473 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 USP10Q14694 798 aaKnown RBP14.86□□□□□ -0.03
VRK3-221ENST00000600284 TGFBIQ15582 683 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 QSOX2Q6ZRP7 698 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 LGI4Q8N135 537 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 DPH5Q9H2P9 285 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 NT5DC2Q9H857 520 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 CNOT10Q9H9A5 744 aaKnown RBP14.86□□□□□ -0.03
VRK3-221ENST00000600284 GPRC5BQ9NZH0 403 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 COPG2Q9UBF2 871 aa14.86□□□□□ -0.03
VRK3-221ENST00000600284 UTP11Q9Y3A2 253 aaKnown RBP14.86□□□□□ -0.03
VRK3-221ENST00000600284 SCN2AQ99250 2005 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 DOPEY1Q5JWR5 2465 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 CPAMD8Q8IZJ3 1885 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 A0A1B0GUH1 482 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 TCRBV9S1A1TA0A576 114 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 A1L4Q6 167 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 FAM159BA6NKW6 160 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 CXorf49A8MYA2 514 aaPredicted RBP14.85□□□□□ -0.03
VRK3-221ENST00000600284 LRRTM2O43300 516 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 RAD51CO43502 376 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 PRMT3O60678 531 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 DNAJB6O75190 326 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 WDR47O94967 919 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 CLDN1O95832 211 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 F10P00742 488 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 RNH1P13489 461 aaKnown RBP14.85□□□□□ -0.03
VRK3-221ENST00000600284 STMN1P16949 149 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 HPDP32754 393 aaPredicted RBP14.85□□□□□ -0.03
VRK3-221ENST00000600284 GP5P40197 560 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 TAS2R50P59544 299 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 ATP6V0D1P61421 351 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 SLCO4C1Q6ZQN7 724 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 CAPN12Q6ZSI9 719 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 C3orf62Q6ZUJ4 267 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 BEST3Q8N1M1 668 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 KRT78Q8N1N4 520 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 SLC5A8Q8N695 610 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 ELP5Q8TE02 316 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 TSLPQ969D9 159 aa14.85□□□□□ -0.03
VRK3-221ENST00000600284 PTCHD1Q96NR3 888 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms