RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 NUP107P57740 925 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CDK16Q00536 496 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 HYAL2Q12891 473 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CTBP1Q13363 440 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CCNG2Q16589 344 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 RNF187Q5TA31 235 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 MFSD4BQ5TF39 518 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 MEI1Q5TIA1 1274 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 TMEM211Q6ICI0 200 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CAPN13Q6MZZ7 669 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 PIWIL4Q7Z3Z4 852 aaKnown RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 MDGA2Q7Z553 956 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ADCK2Q7Z695 626 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ASPGQ86U10 573 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CD163Q86VB7 1156 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 TGIF2LYQ8IUE0 185 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 LIX1LQ8IVB5 337 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 DENND6AQ8IWF6 608 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 SYCE1Q8N0S2 351 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 MMP21Q8N119 569 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 AGGF1Q8N302 714 aaeCLIP5.71□□□□□ -1.5
VRK3-220ENST00000600259 MFSD9Q8NBP5 474 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 FAM98AQ8NCA5 519 aaKnown RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 APCDD1LQ8NCL9 501 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZNF740Q8NDX6 193 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ABHD11Q8NFV4 315 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 OR52N2Q8NGI0 321 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZCCHC10Q8TBK6 192 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 CD200R1Q8TD46 325 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 MCOLN3Q8TDD5 553 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 SLC13A3Q8WWT9 602 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 KCNJ9Q92806 393 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 TBC1D20Q96BZ9 403 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 OR4K3Q96R72 315 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 GPR21Q99679 349 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 FOXC2Q99958 501 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 RBCK1Q9BYM8 510 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 FAM129AQ9BZQ8 928 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 AICDAQ9GZX7 198 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 LIME1Q9H400 295 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 TSPY26PQ9H489 355 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ANKHQ9HCJ1 492 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 KCNJ16Q9NPI9 418 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 NECTIN3Q9NQS3 549 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 DEPPQ9NTK1 212 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ABCF3Q9NUQ8 709 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 INTS10Q9NVR2 710 aaKnown RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZNF358Q9NW07 568 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 COQ3Q9NZJ6 369 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 KCNN3Q9UGI6 736 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 ADAMTS6Q9UKP5 1117 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 PPIEQ9UNP9 301 aaKnown RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 PDE10AQ9Y233 779 aa5.71□□□□□ -1.5
VRK3-220ENST00000600259 RPH3AQ9Y2J0 694 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 KLF13Q9Y2Y9 288 aaPredicted RBP5.71□□□□□ -1.5
VRK3-220ENST00000600259 ZNF407Q9C0G0 2248 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 VPS13CQ709C8 3753 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 FAM237BA0A1B0GVD1 139 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 PINLYPA6NC86 204 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 SAGE2PA6NJ88 616 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 KLRC4-KLRK1H3BQV0 150 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TGFBR3LH3BV60 316 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 AP3B1O00203 1094 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 EIF3FO00303 357 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 PRKNO60260 465 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 B4GALT2O60909 372 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 CTAG2O75638 210 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 HAUS5O94927 633 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 NADKO95544 446 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 SYF2O95926 243 aaKnown RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 PTMAP06454 111 aaKnown RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 TPOP07202 933 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 CDH1P12830 882 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 ENO3P13929 434 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 ALOX12P18054 663 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TPSB2P20231 275 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 GABRB3P28472 473 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 KCNJ1P48048 391 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TAS2R50P59544 299 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TBPL1P62380 186 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 OLR1P78380 273 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 MEF2AQ02078 507 aaPredicted RBP5.7□□□□□ -1.5
VRK3-220ENST00000600259 PMPCAQ10713 525 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 NAE1Q13564 534 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 PWP1Q13610 501 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 HERC3Q15034 1050 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TPSAB1Q15661 275 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 TTLL9Q3SXZ7 439 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 GXYLT1Q4G148 440 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 DEFB134Q4QY38 66 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 XKR6Q5GH73 641 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 THEMIS2Q5TEJ8 643 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 ANKRD22Q5VYY1 191 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 ARMC3Q5W041 872 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 RTL6Q6ICC9 239 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 AGTRAPQ6RW13 159 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 LCTLQ6UWM7 567 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 C4orf22Q6V702 233 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 MBOAT1Q6ZNC8 495 aa5.7□□□□□ -1.5
VRK3-220ENST00000600259 QSOX2Q6ZRP7 698 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms