RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 ZC3H7AQ8IWR0 971 aaKnown RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 CXorf40AQ8TE69 158 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 PPP1R16AQ96I34 528 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 LINC00615Q96LM1 132 aaPredicted RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 CSF3RQ99062 836 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 SLC35A5Q9BS91 424 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 BHLHE41Q9C0J9 482 aaPredicted RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 TRIT1Q9H3H1 467 aaKnown RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 REEP1Q9H902 201 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 CERS4Q9HA82 394 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 ITM2CQ9NQX7 267 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 KIF17Q9P2E2 1029 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 SPASTQ9UBP0 616 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 ZNF282Q9UDV7 671 aaPredicted RBP21.77■■□□□ 1.08
SRRM1-222ENST00000596378 DOCK9Q9BZ29 2069 aa21.77■■□□□ 1.08
SRRM1-222ENST00000596378 hCG_2014768A0A024R1R8 64 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 TBC1D3BA6NDS4 549 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 C5orf67F2Z3F1 127 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 SUV39H1O43463 412 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 NOL3O60936 208 aaKnown RBP21.77■■□□□ 1.07
SRRM1-222ENST00000596378 ANGPTL1O95841 491 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 CNTN1Q12860 1018 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 BNIP3Q12983 259 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 VN1R5Q7Z5H4 357 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 B3GNT8Q7Z7M8 397 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 ATG16L2Q8NAA4 619 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 FGF13Q92913 245 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 THAP11Q96EK4 314 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 RHNO1Q9BSD3 238 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 LGR4Q9BXB1 951 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 WBP1LQ9NX94 342 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 ZNF451Q9Y4E5 1061 aa21.77■■□□□ 1.07
SRRM1-222ENST00000596378 AXIN1O15169 862 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 INMTO95050 263 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 PCCBP05166 539 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 EPHX1P07099 455 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 PCGF2P35227 344 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 IL18R1Q13478 541 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 TMEM52BQ4KMG9 183 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 PRAMEF14Q5SWL7 426 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 PRAMEF13Q5VWM6 474 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 FAM109BQ6ICB4 259 aaPredicted RBP21.76■■□□□ 1.07
SRRM1-222ENST00000596378 TSEN54Q7Z6J9 526 aaKnown RBP21.76■■□□□ 1.07
SRRM1-222ENST00000596378 HEATR4Q86WZ0 1026 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 TERB1Q8NA31 727 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 TTC29Q8NA56 475 aaPredicted RBP21.76■■□□□ 1.07
SRRM1-222ENST00000596378 C11orf65Q8NCR3 313 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 FBLIM1Q8WUP2 373 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 HERVK_113Q902F9 699 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 TANKQ92844 425 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 PPCDCQ96CD2 204 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 NODALQ96S42 347 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 WARS2Q9UGM6 360 aaKnown RBP21.76■■□□□ 1.07
SRRM1-222ENST00000596378 HCN2Q9UL51 889 aa21.76■■□□□ 1.07
SRRM1-222ENST00000596378 C17orf113A0A1B0GUU1 675 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 UGT2B11O75310 529 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 NFATC3Q12968 1075 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 SMN1Q16637 294 aaKnown RBP21.75■■□□□ 1.07
SRRM1-222ENST00000596378 CYP27C1Q4G0S4 372 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 UBE2FQ969M7 185 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 NRBF2Q96F24 287 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 ZNF514Q96K75 400 aaPredicted RBP21.75■■□□□ 1.07
SRRM1-222ENST00000596378 CNDP2Q96KP4 475 aaKnown RBP21.75■■□□□ 1.07
SRRM1-222ENST00000596378 DPEP2Q9H4A9 486 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 KRT84Q9NSB2 600 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 ADPRHL2Q9NX46 363 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 GPR34Q9UPC5 381 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 CORO2BQ9UQ03 480 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 GMPPBQ9Y5P6 360 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 TRIM64BA6NI03 449 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 CCNA2P20248 432 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 PPIBP23284 216 aaKnown RBP21.75■■□□□ 1.07
SRRM1-222ENST00000596378 GET4Q7L5D6 327 aaPredicted RBP21.75■■□□□ 1.07
SRRM1-222ENST00000596378 SPPL2AQ8TCT8 520 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 SUSD6Q92537 303 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 SMARCD2Q92925 531 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 EHD1Q9H4M9 534 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 ERVK-18Q9QC07 812 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 RWDD3Q9Y3V2 267 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 MAP4K5Q9Y4K4 846 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 SNX5Q9Y5X3 404 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 COL4A3Q01955 1670 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 SZT2Q5T011 3432 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 ALPK3Q96L96 1907 aa21.75■■□□□ 1.07
SRRM1-222ENST00000596378 KIF26AQ9ULI4 1882 aaPredicted RBP21.74■■□□□ 1.07
SRRM1-222ENST00000596378 IL3P08700 152 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 PCMT1P22061 227 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 RRM2P31350 389 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 OR1E2P47887 323 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 TMBIM6P55061 237 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 CYP4F2P78329 520 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 TOP3AQ13472 1001 aaPredicted RBP21.74■■□□□ 1.07
SRRM1-222ENST00000596378 FAM71E1Q6IPT2 247 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 PIWIL3Q7Z3Z3 882 aaKnown RBP21.74■■□□□ 1.07
SRRM1-222ENST00000596378 METTL4Q8N3J2 472 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 CXorf40BQ96DE9 158 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 SPATA9Q9BWV2 254 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 RUBCNLQ9H714 662 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 PRSS16Q9NQE7 514 aa21.74■■□□□ 1.07
SRRM1-222ENST00000596378 TMEM184CQ9NVA4 438 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms