RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 PPP1R32Q7Z5V6 425 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 PRSS58Q8IYP2 241 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 CLEC1AQ8NC01 280 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 C9orf43Q8TAL5 461 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 UTP15Q8TED0 518 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 ATP6V1E2Q96A05 226 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 REPS1Q96D71 796 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 PHF21BQ96EK2 531 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 PARD6BQ9BYG5 372 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 SLC25A18Q9H1K4 315 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 ACTR8Q9H981 624 aa16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-212ENST00000596163 IDSB3KWA1 339 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 BMP10O95393 424 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 NUDT17P0C025 328 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 EEF1DP29692 281 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 XCR1P46094 333 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 SLCO1A2P46721 670 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 CCT5P48643 541 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 PHEXP78562 749 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 MAT1AQ00266 395 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 GRHL2Q6ISB3 625 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 RIBC1Q8N443 379 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 SRFBP1Q8NEF9 429 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 MZB1Q8WU39 189 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 METTL21AQ8WXB1 218 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 GAL3ST3Q96A11 431 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 ABHD17AQ96GS6 310 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 ROPN1BQ9BZX4 212 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 IPPKQ9H8X2 491 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 ROPN1Q9HAT0 212 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 ATP13A2Q9NQ11 1180 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 HCN3Q9P1Z3 774 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 MKL2Q9ULH7 1088 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 PCDHGA11Q9Y5H2 935 aa16.36■□□□□ 0.21
SHKBP1-212ENST00000596163 NBEAQ8NFP9 2946 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 TLDC2A0PJX2 215 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 LRIT2A6NDA9 550 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 SMIM23A6NLE4 172 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 GOLGA8RI6L899 631 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 GLRA3O75311 464 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 RDH16O75452 317 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 SMIM10L1P0DMW3 83 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 ACPPP15309 386 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 FOXL2P58012 376 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 RAB8AP61006 207 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 C19orf57Q0VDD7 668 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 HYAL2Q12891 473 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 SYT16Q17RD7 645 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 TUBB8Q3ZCM7 444 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 DCAF10Q5QP82 559 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 MFSD4BQ5TF39 518 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 TCTN3Q6NUS6 607 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 TRIM40Q6P9F5 258 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 CHSY3Q70JA7 882 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PRSS41Q7RTY9 318 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 GOLGA7Q7Z5G4 137 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PDSS2Q86YH6 399 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 MYLK4Q86YV6 388 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 ZC3H7AQ8IWR0 971 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 LAS2Q8IYD9 372 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 SMIM10Q96HG1 83 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 MAGEB10Q96LZ2 347 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 OR1F2PQ96R84 312 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 SLC25A23Q9BV35 468 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 ROGDIQ9GZN7 287 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 KLHL31Q9H511 634 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 TMEM216Q9P0N5 145 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PCDHGB7Q9Y5F8 929 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PCDHGA9Q9Y5G4 932 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 HS3ST3B1Q9Y662 390 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 MGAQ8IWI9 3026 aa16.35■□□□□ 0.21
SHKBP1-212ENST00000596163 PSMD12O00232 456 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 E2F3O00716 465 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 SOCS6O14544 535 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 FFAR3O14843 346 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 GPR42O15529 346 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 SIX3O95343 332 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CLDN9O95484 217 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 PCNAP12004 261 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CD22P20273 847 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 JAK1P23458 1154 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CCNG1P51959 295 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CHAF1BQ13112 559 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 MINDY4Q4G0A6 757 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 TMEM35AQ53FP2 167 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 LACTB2Q53H82 288 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 IRAK1BP1Q5VVH5 260 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 CPZQ66K79 652 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 KIRREL2Q6UWL6 708 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 LAPTM4BQ86VI4 370 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 SLC22A9Q8IVM8 553 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 OR2L5Q8NG80 312 aa16.34■□□□□ 0.21
SHKBP1-212ENST00000596163 OR7G3Q8NG95 312 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms