RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SLC1A2P43004 574 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 MEOX1P50221 254 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 NAE1Q13564 534 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 DHX34Q14147 1143 aaKnown RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 HERC3Q15034 1050 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 DEFB134Q4QY38 66 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 ANKRD22Q5VYY1 191 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 LCTLQ6UWM7 567 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 GSTA5Q7RTV2 222 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 NFAM1Q8NET5 270 aaPredicted RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 ABHD11Q8NFV4 315 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 LILRB4Q8NHJ6 448 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 C16orf52Q8NHV5 167 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 TMEM125Q96AQ2 219 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 ZNF669Q96BR6 464 aaPredicted RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 AARSD1Q9BTE6 412 aaKnown RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 ATG10Q9H0Y0 220 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 CCDC68Q9H2F9 335 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 PLSCR2Q9NRY7 297 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 ADAMTS6Q9UKP5 1117 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 RNF6Q9Y252 685 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 ZKSCAN5Q9Y2L8 839 aa9.33□□□□□ -0.92
LIG1-209ENST00000596104 KLF13Q9Y2Y9 288 aaPredicted RBP9.33□□□□□ -0.92
LIG1-209ENST00000596104 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.32□□□□□ -0.92
LIG1-209ENST00000596104 TCRBV16S1A1N1A0A5B0 115 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 TFECO14948 347 aaPredicted RBP9.32□□□□□ -0.92
LIG1-209ENST00000596104 NDUFS4O43181 175 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 HS6ST1O60243 411 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 DIAPH2O60879 1101 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 B4GALT2O60909 372 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 ALOX12P18054 663 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 CHRNB4P30926 498 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 RFC3P40938 356 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 NR0B1P51843 470 aaKnown RBP9.32□□□□□ -0.92
LIG1-209ENST00000596104 ART1P52961 327 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 OLR1P78380 273 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 BTG2P78543 158 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 TIAL1Q01085 375 aaKnown RBP eCLIP9.32□□□□□ -0.92
LIG1-209ENST00000596104 PWP1Q13610 501 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 THOC5Q13769 683 aaKnown RBP9.32□□□□□ -0.92
LIG1-209ENST00000596104 CASC4Q6P4E1 433 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 QSOX2Q6ZRP7 698 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 CEP128Q6ZU80 1094 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 SULF2Q8IWU5 870 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 DMRTC2Q8IXT2 367 aaPredicted RBP9.32□□□□□ -0.92
LIG1-209ENST00000596104 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
LIG1-209ENST00000596104 RPRMLQ8N4K4 120 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 ZFP62Q8NB50 900 aaPredicted RBP9.32□□□□□ -0.92
LIG1-209ENST00000596104 OR4K1Q8NGD4 311 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 ASB5Q8WWX0 329 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 PTCHD1Q96NR3 888 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 UCK2Q9BZX2 261 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 FBXO5Q9UKT4 447 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 COMMD10Q9Y6G5 202 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 SCN2AQ99250 2005 aa9.32□□□□□ -0.92
LIG1-209ENST00000596104 TRBC2A0A5B9 178 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MAGEB16A2A368 324 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 CTAGE15A4D2H0 777 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 NKX2-6A6NCS4 301 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 FAM90A27PA6NNH2 459 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 FOXO6A8MYZ6 492 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 OR1F1O43749 312 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 PEX1O43933 1283 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 CEP104O60308 925 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 PRMT3O60678 531 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 HAUS5O94927 633 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 FGGP02679 453 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 C8GP07360 202 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MLNP12872 115 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MAOAP21397 527 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 CCND1P24385 295 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MSX1P28360 303 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 GRK3P35626 688 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MAGEA3P43357 314 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 VPS41P49754 854 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 CCR8P51685 355 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 TERF1P54274 439 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MEF2AQ02078 507 aaPredicted RBP9.31□□□□□ -0.92
LIG1-209ENST00000596104 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
LIG1-209ENST00000596104 SP140Q13342 867 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 TRIP13Q15645 432 aaPredicted RBP9.31□□□□□ -0.92
LIG1-209ENST00000596104 PHKG1Q16816 387 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 EMC4Q5J8M3 183 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 TMEM211Q6ICI0 200 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 LRRC8EQ6NSJ5 796 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 MDGA2Q7Z553 956 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 STRA8Q7Z7C7 330 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 CTAGE6Q86UF2 777 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 CCDC71Q8IV32 467 aaPredicted RBP9.31□□□□□ -0.92
LIG1-209ENST00000596104 CYP4X1Q8N118 509 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 APCDD1LQ8NCL9 501 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 NT5CQ8TCD5 201 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 UTP15Q8TED0 518 aaKnown RBP9.31□□□□□ -0.92
LIG1-209ENST00000596104 EEF1AKMT1Q8WVE0 214 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 ALKBH8Q96BT7 664 aaKnown RBP9.31□□□□□ -0.92
LIG1-209ENST00000596104 OR4K3Q96R72 315 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 HAUS8Q9BT25 410 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 TMUB1Q9BVT8 246 aa9.31□□□□□ -0.92
LIG1-209ENST00000596104 DEFB126Q9BYW3 111 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms