RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 A6NNC1 897 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 PEX1O43933 1283 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 VPS26AO75436 327 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 RAF1P04049 648 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 APOA4P06727 396 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 GLI4P10075 376 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 MLNP12872 115 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 AOAHP28039 575 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 PPARGP37231 505 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 XCR1P46094 333 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 CYB561P49447 251 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 TTPAP49638 278 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 GPR85P60893 370 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 GNG11P61952 73 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 KEAP1Q14145 624 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 ARMC3Q5W041 872 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 MCUQ8NE86 351 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 C16orf52Q8NHV5 167 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 SKA2Q8WVK7 121 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 SERPINB12Q96P63 405 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 MACROD1Q9BQ69 325 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 RAB11FIP5Q9BXF6 653 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 RBCK1Q9BYM8 510 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 SLC6A16Q9GZN6 736 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 P2RY12Q9H244 342 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 PLSCR2Q9NRY7 297 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 Q9UFV3 132 aa12.87□□□□□ -0.35
SHKBP1-208ENST00000595726 F8W8V4 182 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 PRMT5O14744 637 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 CDC123O75794 336 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 VAPBO95292 243 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 ADH7P40394 386 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 MAGEA3P43357 314 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 AVPR1BP47901 424 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 ZFP36L2P47974 494 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 AGTR2P50052 363 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 SLC26A5P58743 744 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 TAS2R50P59544 299 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 USP10Q14694 798 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 NSDHLQ15738 373 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 KIAA0930Q6ICG6 404 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 NAT8LQ8N9F0 302 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 POGLUT1Q8NBL1 392 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 SLCO2A1Q92959 643 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 TSLPQ969D9 159 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 TMEM125Q96AQ2 219 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 CCDC138Q96M89 665 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 CARD6Q9BX69 1037 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 DDX47Q9H0S4 455 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 MRPS30Q9NP92 439 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 PCYOX1Q9UHG3 505 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 PHF3Q92576 2039 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 HIVEP2P31629 2446 aa12.86□□□□□ -0.35
SHKBP1-208ENST00000595726 ARHGEF33A8MVX0 844 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 GOLGA8KD6RF30 607 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 GOLGA8TH3BQL2 631 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 SGK494L7N484 410 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 SLC16A5O15375 505 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 RPS3P23396 243 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 ACVR2AP27037 513 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 HLCSP50747 726 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 NKX6-1P78426 367 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 PTK6Q13882 451 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 FAM53BQ14153 422 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 ABRAXAS2Q15018 415 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 RNASEH2BQ5TBB1 312 aaKnown RBP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 ZNF425Q6IV72 752 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 CASC4Q6P4E1 433 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 MDGA2Q7Z553 956 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 WDR53Q7Z5U6 358 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 CREG2Q8IUH2 290 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 LGI4Q8N135 537 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 RAB42Q8N4Z0 105 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 ELP5Q8TE02 316 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 CAPZA3Q96KX2 299 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 LPAR4Q99677 370 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 NAPGQ99747 312 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 TSSK1BQ9BXA7 367 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 TRIM45Q9H8W5 580 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 SAMD15Q9P1V8 674 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 KLF13Q9Y2Y9 288 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
SHKBP1-208ENST00000595726 H0YIG0 161 aa12.84□□□□□ -0.35
SHKBP1-208ENST00000595726 KLRC4-KLRK1H3BQV0 150 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms