RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SLC6A16Q9GZN6 736 aa19.84■□□□□ 0.77
PNKP-203ENST00000593946 GAREM1Q9H706 876 aa19.84■□□□□ 0.77
PNKP-203ENST00000593946 MYNNQ9NPC7 610 aa19.84■□□□□ 0.77
PNKP-203ENST00000593946 ADAM29Q9UKF5 820 aa19.84■□□□□ 0.77
PNKP-203ENST00000593946 SLC6A14Q9UN76 642 aa19.84■□□□□ 0.77
PNKP-203ENST00000593946 MAPRE3Q9UPY8 281 aa19.84■□□□□ 0.77
PNKP-203ENST00000593946 NUP214P35658 2090 aaPredicted RBP19.84■□□□□ 0.77
PNKP-203ENST00000593946 DMDP11532 3685 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 RTCAO00442 366 aaKnown RBP19.83■□□□□ 0.77
PNKP-203ENST00000593946 AKAP10O43572 662 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 PRAMEF10O60809 474 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 STATHP02808 62 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 ARFIP1P53367 373 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 PSME3P61289 254 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 ELF3P78545 371 aaPredicted RBP19.83■□□□□ 0.77
PNKP-203ENST00000593946 NR1D2Q14995 579 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 UGT8Q16880 541 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 TRMT5Q32P41 509 aaKnown RBP19.83■□□□□ 0.77
PNKP-203ENST00000593946 TRIM61Q5EBN2 209 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 PGM2L1Q6PCE3 622 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 SLC2A7Q6PXP3 512 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 FAM13CQ8NE31 585 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 OR4C6Q8NH72 309 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 CDC26Q8NHZ8 85 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 C16orf78Q8WTQ4 265 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 TM4SF19Q96DZ7 209 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 MACROD1Q9BQ69 325 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 GPATCH1Q9BRR8 931 aaKnown RBP19.83■□□□□ 0.77
PNKP-203ENST00000593946 RAB33BQ9H082 229 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 KLHL31Q9H511 634 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 GID8Q9NWU2 228 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 CROTQ9UKG9 612 aa19.83■□□□□ 0.77
PNKP-203ENST00000593946 WDR87Q6ZQQ6 2873 aa19.83■□□□□ 0.76
PNKP-203ENST00000593946 SCAMP2O15127 329 aaKnown RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 CAPN5O15484 640 aaPredicted RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 NPPAP01160 153 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 ST6GAL1P15907 406 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 S100A3P33764 101 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 PHC1P78364 1004 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 PWP1Q13610 501 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 LPAL2Q16609 132 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 IRGCQ6NXR0 463 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 BNC2Q6ZN30 1099 aaPredicted RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 ASPGQ86U10 573 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 NUDT13Q86X67 352 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 NT5CQ8TCD5 201 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 QRFPRQ96P65 431 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 OR52E6Q96RD3 313 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 DDX31Q9H8H2 851 aaKnown RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 EPHA6Q9UF33 1036 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 EXO1Q9UQ84 846 aaKnown RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 SCN3AQ9NY46 2000 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 A0A0J9YVX5 310 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 C4orf51C9J302 202 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 ALPPL2P10696 532 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 CDH3P22223 829 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 GPR3P46089 330 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 CCT8P50990 548 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 STXBP1P61764 594 aaKnown RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 SRSF11Q05519 484 aaKnown RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 FOXM1Q08050 763 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 NFYCQ13952 458 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 CCNYL2Q5T2Q4 361 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 OR4C11Q6IEV9 310 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 FAM71E1Q6IPT2 247 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 CAMKMTQ7Z624 323 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 MINDY1Q8N5J2 469 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 OR2L5Q8NG80 312 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 OR7A2PQ8NGA2 310 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 OR8J2Q8NGG1 315 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 LRRC58Q96CX6 371 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 TRAPPC9Q96Q05 1148 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 TEFMQ96QE5 360 aaKnown RBP19.82■□□□□ 0.76
PNKP-203ENST00000593946 CDRT15Q96T59 188 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 C17orf62Q9BQA9 187 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 SLC39A3Q9BRY0 314 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 EPB41L1Q9H4G0 881 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 C11orf16Q9NQ32 467 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 C1GALT1Q9NS00 363 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 SLC7A8Q9UHI5 535 aa19.82■□□□□ 0.76
PNKP-203ENST00000593946 RALGAPA1Q6GYQ0 2036 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 IGHV1OR21-1A0A087WYE8 117 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 FAM86C2PA6NEL3 165 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 TRIM38O00635 465 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 ARHGAP33O14559 1287 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 ERI3O43414 337 aaKnown RBP19.81■□□□□ 0.76
PNKP-203ENST00000593946 CER1O95813 267 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 SLC35G6P0C7Q6 338 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 ALDH4A1P30038 563 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 HPCAL1P37235 193 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 KIR3DL1P43629 444 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 PLA2G16P53816 162 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 MTTPP55157 894 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 TAS2R50P59544 299 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 RGS1Q08116 209 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 MAPKAPK3Q16644 382 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 TOR1AIP1Q5JTV8 583 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 FRMPD2BQ6IN97 320 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 ABHD17CQ6PCB6 329 aa19.81■□□□□ 0.76
PNKP-203ENST00000593946 MSANTD1Q6ZTZ1 278 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms