RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 IQANK1A0A1B0GTG1 560 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 A0A1B0GTL3 188 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 PPP6CO00743 305 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 OR7A17O14581 309 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 GALR3O60755 368 aaPredicted RBP10.9□□□□□ -0.66
VMP1-211ENST00000591315 BMP10O95393 424 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 NSA2O95478 260 aaKnown RBP10.9□□□□□ -0.66
VMP1-211ENST00000591315 RBP1P09455 135 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 SLC35G6P0C7Q6 338 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 SMIM10L1P0DMW3 83 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 COL6A2P12110 1019 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 ALOX12P18054 663 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 TSPAN8P19075 237 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 MMP11P24347 488 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 AVPR1BP47901 424 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 PIK3CGP48736 1102 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 EMP2P54851 167 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 OCA2Q04671 838 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 EEF1A2Q05639 463 aaKnown RBP10.9□□□□□ -0.66
VMP1-211ENST00000591315 RGS1Q08116 209 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 NFATC3Q12968 1075 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 PWP1Q13610 501 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 GTF2H2Q13888 395 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 PCBP2Q15366 365 aaKnown RBP eCLIP10.9□□□□□ -0.66
VMP1-211ENST00000591315 LGSNQ5TDP6 509 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 GTF2H2CQ6P1K8 395 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 SH2D5Q6ZV89 423 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 RAB43Q86YS6 212 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 TBC1D19Q8N5T2 526 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 MTBPQ96DY7 904 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 MVB12AQ96EY5 273 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 PTCD3Q96EY7 689 aaKnown RBP10.9□□□□□ -0.66
VMP1-211ENST00000591315 PEX11GQ96HA9 241 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 SMIM10Q96HG1 83 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 CDK15Q96Q40 435 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 F2RL3Q96RI0 385 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 MRPL57Q9BQC6 102 aaKnown RBP10.9□□□□□ -0.66
VMP1-211ENST00000591315 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 ZBTB26Q9HCK0 441 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 FETUBQ9UGM5 382 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 EMCNQ9ULC0 261 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 TP53TG5Q9Y2B4 290 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 RNF11Q9Y3C5 154 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 MAP4K5Q9Y4K4 846 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 SLC22A7Q9Y694 548 aa10.9□□□□□ -0.66
VMP1-211ENST00000591315 RP1L1Q8IWN7 2480 aaPredicted RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 IGHV3-20A0A0C4DH32 117 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 TLDC2A0PJX2 215 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 LRIT2A6NDA9 550 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 A8MT66 165 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 IDSB3KWA1 339 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 FAM227AF5H4B4 570 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 H0YIG0 161 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 E2F3O00716 465 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 CHST10O43529 356 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 CDC123O75794 336 aaPredicted RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 SERPINA6P08185 405 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 CELA2AP08217 269 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 PCNAP12004 261 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 EPB42P16452 691 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 CASP2P42575 452 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 XCR1P46094 333 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 CDH13P55290 713 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 BTN3A2P78410 334 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 Q0VFX4 171 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 DDX39BQ13838 428 aaKnown RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 E2F2Q14209 437 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 TBCCQ15814 346 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 RBBP7Q16576 425 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 TSNAXIP1Q2TAA8 658 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 DCAF10Q5QP82 559 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 WDR93Q6P2C0 686 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 LANCL3Q6ZV70 420 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 UBE3DQ7Z6J8 389 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 APLFQ8IW19 511 aaPredicted RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 KRT78Q8N1N4 520 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 TRPV3Q8NET8 790 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 FDCSPQ8NFU4 85 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 OR11G2Q8NGC1 345 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 OR52B6Q8NGF0 335 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.89□□□□□ -0.67
VMP1-211ENST00000591315 MS4A6EQ96DS6 147 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 CCDC77Q9BR77 488 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 SORBS1Q9BX66 1292 aaKnown RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 CAPS2Q9BXY5 557 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 FAM117AQ9C073 453 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 VN1R1Q9GZP7 353 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 MRPL46Q9H2W6 279 aaKnown RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 RHBGQ9H310 441 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 EHD1Q9H4M9 534 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 NT5DC2Q9H857 520 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 NOL11Q9H8H0 719 aaKnown RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 IPPKQ9H8X2 491 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 MKKSQ9NPJ1 570 aaPredicted RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 COPG2Q9UBF2 871 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 PCTPQ9UKL6 214 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 MKL2Q9ULH7 1088 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 ANGPTL3Q9Y5C1 460 aa10.89□□□□□ -0.67
VMP1-211ENST00000591315 GCN1Q92616 2671 aaKnown RBP10.89□□□□□ -0.67
VMP1-211ENST00000591315 EIF4E1BA6NMX2 242 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms