RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 AICDAQ9GZX7 198 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 LY6G6EA0A0G2JKS1 128 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 TLCD2A6NGC4 264 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 B4GAT1O43505 415 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 KRT16P08779 473 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 SLC35G6P0C7Q6 338 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 PRPS1L1P21108 318 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 BSGP35613 385 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 GFERP55789 205 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 SLC25A3Q00325 362 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 TIGD2Q4W5G0 525 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 LAIR1Q6GTX8 287 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 UBE3DQ7Z6J8 389 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 RIMKLAQ8IXN7 391 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 NT5CQ8TCD5 201 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 VPS33AQ96AX1 596 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 MS4A6EQ96DS6 147 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 TM4SF19Q96DZ7 209 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 QRFPRQ96P65 431 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 SORBS1Q9BX66 1292 aaKnown RBP16.64■□□□□ 0.25
CXXC1-212ENST00000589940 SLC6A16Q9GZN6 736 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 RRP15Q9Y3B9 282 aaKnown RBP16.64■□□□□ 0.25
CXXC1-212ENST00000589940 U3KQA8 63 aa16.64■□□□□ 0.25
CXXC1-212ENST00000589940 MDC1Q14676 2089 aaKnown RBP16.63■□□□□ 0.25
CXXC1-212ENST00000589940 CFAP73A6NFT4 308 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 SLC9B1P1A6NJY1 282 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 RTCAO00442 366 aaKnown RBP16.63■□□□□ 0.25
CXXC1-212ENST00000589940 MRASO14807 208 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 GBAP04062 536 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 ITGAXP20702 1163 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 ARFIP1P53367 373 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 ATXN3P54252 364 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-212ENST00000589940 C21orf58P58505 322 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 STXBP1P61764 594 aaKnown RBP16.63■□□□□ 0.25
CXXC1-212ENST00000589940 RGS1Q08116 209 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 ART3Q13508 389 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 SPRED1Q7Z699 444 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 NUDT13Q86X67 352 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 Q8N9G6 341 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-212ENST00000589940 NUDT8Q8WV74 236 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 RERGQ96A58 199 aaPredicted RBP16.63■□□□□ 0.25
CXXC1-212ENST00000589940 TESCQ96BS2 214 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 KLHL31Q9H511 634 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 LHX9Q9NQ69 397 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 ADAM29Q9UKF5 820 aa16.63■□□□□ 0.25
CXXC1-212ENST00000589940 KIF1CO43896 1103 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 LRATO95237 230 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 IL6P05231 212 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 TPP2P29144 1249 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 PLA2G16P53816 162 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CORO7P57737 925 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 KCNJ2P63252 427 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 FAM174BQ3ZCQ3 159 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 AMZ1Q400G9 498 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 TOR1AIP1Q5JTV8 583 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 OR4C11Q6IEV9 310 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 FRMPD2BQ6IN97 320 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 RIPOR1Q6ZS17 1223 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 RETREG3Q86VR2 466 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 DSELQ8IZU8 1212 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 SRFBP1Q8NEF9 429 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 OR2L5Q8NG80 312 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CDC26Q8NHZ8 85 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 KCNC2Q96PR1 638 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 C17orf62Q9BQA9 187 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 COL25A1Q9BXS0 654 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CADM1Q9BY67 442 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 MAPRE3Q9UPY8 281 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 LOC105369274A0A096LPK9 316 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 LOC102723532A0A0G2JNH3 316 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 H0YGG7 62 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 GSC2O15499 205 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CFLARO15519 480 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 ERI3O43414 337 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 KLHL18O94889 574 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 ZNF883P0CG24 379 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CD1CP29017 333 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 ARF3P61204 181 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 HKDC1Q2TB90 917 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 SPANXN4Q5MJ08 99 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CCNYL2Q5T2Q4 361 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 GUSBP11Q6P575 273 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 PLXDC1Q8IUK5 500 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 OR4N4Q8N0Y3 316 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CARFQ8N187 725 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 CAMKVQ8NCB2 501 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 STARD8Q92502 1023 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 GFM2Q969S9 779 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 TCTN2Q96GX1 697 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 DDX31Q9H8H2 851 aaKnown RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 FAM60AQ9NP50 221 aa16.62■□□□□ 0.25
CXXC1-212ENST00000589940 LEF1Q9UJU2 399 aaPredicted RBP16.62■□□□□ 0.25
CXXC1-212ENST00000589940 ARHGAP10A1A4S6 786 aa16.61■□□□□ 0.25
CXXC1-212ENST00000589940 CPED1A4D0V7 1026 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms