RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 HYAL2Q12891 473 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 USP10Q14694 798 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 HERC3Q15034 1050 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 KRTCAP3Q53RY4 240 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 HP1BP3Q5SSJ5 553 aaPredicted RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 CATSPEREQ5SY80 951 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 RBM20Q5T481 1227 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 SLC25A25Q6KCM7 469 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 UGT3A1Q6NUS8 523 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 CCDC137Q6PK04 289 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 CTAGE6Q86UF2 777 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 RPS19BP1Q86WX3 136 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 DOLPP1Q86YN1 238 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 CEP97Q8IW35 865 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 MYO1HQ8N1T3 1032 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 CPSF7Q8N684 471 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 HORMAD2Q8N7B1 307 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 TMEM178AQ8NBL3 297 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 MFSD9Q8NBP5 474 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.02□□□□□ -1.45
SDF2-205ENST00000587629 MCUQ8NE86 351 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 PLPP5Q8NEB5 264 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 CALML6Q8TD86 181 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 AGAP11Q8TF27 550 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 THAP3Q8WTV1 239 aaPredicted RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 TBC1D20Q96BZ9 403 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 MTFMTQ96DP5 389 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 THAP11Q96EK4 314 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SCMH1Q96GD3 660 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SNF8Q96H20 258 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 HIST1H2AHQ96KK5 128 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SIGLEC10Q96LC7 697 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 TSNARE1Q96NA8 513 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 PTCHD1Q96NR3 888 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 HIST1H2AJQ99878 128 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 TRIM51Q9BSJ1 452 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 FAM167BQ9BTA0 163 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 H2AFJQ9BTM1 129 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 PRR14Q9BWN1 585 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SGPP1Q9BX95 441 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 PCBD2Q9H0N5 130 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SPNS1Q9H2V7 528 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 GPAMQ9HCL2 828 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 PPANQ9NQ55 473 aaKnown RBP6.02□□□□□ -1.45
SDF2-205ENST00000587629 ARL15Q9NXU5 204 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 SLC17A6Q9P2U8 582 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 ZNF835Q9Y2P0 537 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 COMMD10Q9Y6G5 202 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 CPAMD8Q8IZJ3 1885 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 HEATR5BQ9P2D3 2071 aa6.02□□□□□ -1.45
SDF2-205ENST00000587629 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ASPDHA6ND91 283 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 PABPN1LA6NDY0 278 aaKnown RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 CDC40O60508 579 aaKnown RBP eCLIP6.01□□□□□ -1.45
SDF2-205ENST00000587629 PRMT3O60678 531 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 GALR3O60755 368 aaPredicted RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 PDE9AO76083 593 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 AHSGP02765 367 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 CYC1P08574 325 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ZNF24P17028 368 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ALOX12P18054 663 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 SAT1P21673 171 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 CCND1P24385 295 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 MAGEA3P43357 314 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 CYB561P49447 251 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ITGA8P53708 1063 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 IL2P60568 153 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 DHX9Q08211 1270 aaKnown RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 CSHL1Q14406 222 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 CRYMQ14894 314 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 RBBP5Q15291 538 aaKnown RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 LCTLQ6UWM7 567 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 Q6ZPB1 254 aaPredicted RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 CEP128Q6ZU80 1094 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 FGD2Q7Z6J4 655 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ZNF227Q86WZ6 799 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 SIAH3Q8IW03 269 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 GHDCQ8N2G8 530 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 AFAP1L2Q8N4X5 818 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 GPATCH11Q8N954 259 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 NAT8LQ8N9F0 302 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 FAM98AQ8NCA5 519 aaKnown RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 C2CD4AQ8NCU7 369 aaPredicted RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 TRIM58Q8NG06 486 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ELP5Q8TE02 316 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 CA5BP1Q8WTZ4 195 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 NEIL2Q969S2 332 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 SDCCAG3Q96C92 435 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 OR4K3Q96R72 315 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 OR1F2PQ96R84 312 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 HAUS8Q9BT25 410 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 TMUB1Q9BVT8 246 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 KLHL31Q9H511 634 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 NPDC1Q9NQX5 325 aaPredicted RBP6.01□□□□□ -1.45
SDF2-205ENST00000587629 TAS2R13Q9NYV9 303 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 PPT2Q9UMR5 302 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 PCDHGB6Q9Y5F9 930 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 SLC22A7Q9Y694 548 aa6.01□□□□□ -1.45
SDF2-205ENST00000587629 ADGRG4Q8IZF6 3080 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms