RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 USH1CQ9Y6N9 552 aa17.41■□□□□ 0.38
H3F3B-206ENST00000587560 TMEM150CB9EJG8 249 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 SDHDO14521 159 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 TXNDC9O14530 226 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 MAP3K7O43318 606 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 CRCPO75575 148 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 MED26O95402 600 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 CCL4P13236 92 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 PTX3P26022 381 aaPredicted RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 ARL4DP49703 201 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 ARFIP1P53367 373 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 CYP4F2P78329 520 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 TBL3Q12788 808 aaKnown RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 EIF3IQ13347 325 aaKnown RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 HKDC1Q2TB90 917 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 KHDRBS2Q5VWX1 349 aaKnown RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 SCIMPQ6UWF3 145 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 BPHLQ86WA6 291 aaPredicted RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 CSNK1A1LQ8N752 337 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 KCT2Q8NC54 265 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 CAMKVQ8NCB2 501 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 MTFMTQ96DP5 389 aaKnown RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 MS4A6EQ96DS6 147 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 CMTM7Q96FZ5 175 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 HBEGFQ99075 208 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 MACROD1Q9BQ69 325 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 KLHL31Q9H511 634 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 LHX9Q9NQ69 397 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 SIRT5Q9NXA8 310 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 RUVBL1Q9Y265 456 aaKnown RBP17.4■□□□□ 0.38
H3F3B-206ENST00000587560 FIS1Q9Y3D6 152 aa17.4■□□□□ 0.38
H3F3B-206ENST00000587560 SEC16AO15027 2179 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 CCDC187A0A096LP49 1063 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 GMNCA6NCL1 334 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 EFCAB7A8K855 629 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 SLC28A1O00337 649 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 ZSCAN9O15535 394 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-206ENST00000587560 NDUFS4O43181 175 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 SEMA3DO95025 777 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 CHEK2O96017 543 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 TGFB1P01137 390 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 VIMP08670 466 aaKnown RBP17.39■□□□□ 0.37
H3F3B-206ENST00000587560 KITP10721 976 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 DRD4P21917 467 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 ETV5P41161 510 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 ITGA1P56199 1179 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 PHEXP78562 749 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 FOXC1Q12948 553 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 TUBB3Q13509 450 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 DDX39BQ13838 428 aaKnown RBP17.39■□□□□ 0.37
H3F3B-206ENST00000587560 IL11RAQ14626 422 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 KIAA0040Q15053 153 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 SGO1Q5FBB7 561 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 EPGNQ6UW88 154 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 RERGQ96A58 199 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-206ENST00000587560 C19orf60Q96EN9 201 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 FCRL1Q96LA6 429 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 C10orf90Q96M02 699 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 OR6C1Q96RD1 312 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 SERPINI1Q99574 410 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 CMKLR1Q99788 373 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 OR51B5Q9H339 312 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 MRPS2Q9Y399 296 aaKnown RBP17.39■□□□□ 0.37
H3F3B-206ENST00000587560 LOXL2Q9Y4K0 774 aa17.39■□□□□ 0.37
H3F3B-206ENST00000587560 PMS2P1A4D2B8 440 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 SKAP2O75563 359 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 RSL1D1O76021 490 aaKnown RBP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 SCELO95171 688 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 STATHP02808 62 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 SLC35G6P0C7Q6 338 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 LINC00032P0C843 101 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 HMGCS1Q01581 520 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 TARDBPQ13148 414 aaKnown RBP eCLIP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 PDCD2Q16342 344 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 TMEM35AQ53FP2 167 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 VWA5B1Q5TIE3 1220 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 GARNL3Q5VVW2 1013 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 TLDC1Q6P9B6 456 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 LARP4Q71RC2 724 aaKnown RBP eCLIP17.38■□□□□ 0.378e-7■□□□□ 8.4
H3F3B-206ENST00000587560 RAB11FIP2Q7L804 512 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 UTP15Q8TED0 518 aaKnown RBP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 CHTF18Q8WVB6 975 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 GAL3ST3Q96A11 431 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 METTL2AQ96IZ6 378 aaKnown RBP17.38■□□□□ 0.37
H3F3B-206ENST00000587560 QRFPRQ96P65 431 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 F2RL3Q96RI0 385 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 SIKE1Q9BRV8 207 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 NUF2Q9BZD4 464 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 APMAPQ9HDC9 416 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 PRDM7Q9NQW5 492 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 STARD5Q9NSY2 213 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 SLC22A7Q9Y694 548 aa17.38■□□□□ 0.37
H3F3B-206ENST00000587560 SCN3AQ9NY46 2000 aa17.37■□□□□ 0.37
H3F3B-206ENST00000587560 CELSR3Q9NYQ7 3312 aa17.37■□□□□ 0.37
H3F3B-206ENST00000587560 TRPC5OSA6NMA1 111 aa17.37■□□□□ 0.37
H3F3B-206ENST00000587560 LSM1O15116 133 aaKnown RBP17.37■□□□□ 0.37
H3F3B-206ENST00000587560 OR2B3O76000 313 aa17.37■□□□□ 0.37
H3F3B-206ENST00000587560 KLHL18O94889 574 aa17.37■□□□□ 0.37
H3F3B-206ENST00000587560 BSGP35613 385 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms