RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 GRIA1P42261 906 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 MEOX1P50221 254 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 DGKQP52824 942 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 TAS2R50P59544 299 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 ADAM8P78325 824 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 IFFO1Q0D2I5 559 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 TSTA3Q13630 321 aaPredicted RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 NAA25Q14CX7 972 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 EXT1Q16394 746 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CCDC38Q502W7 563 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 GARNL3Q5VVW2 1013 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 FBXO42Q6P3S6 717 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 ANKRD37Q7Z713 158 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 ZZZ3Q8IYH5 903 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CLYBLQ8N0X4 340 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 KRT222Q8N1A0 295 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 MCUQ8NE86 351 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 OR52K1Q8NGK4 314 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 PYROXD1Q8WU10 500 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 RAD51AP1Q96B01 352 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CFAP36Q96G28 342 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 SERPINB12Q96P63 405 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 ALPK1Q96QP1 1244 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CYTH2Q99418 400 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 TTC1Q99614 292 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 MDFIQ99750 246 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 OLFM1Q99784 485 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CLEC4MQ9H2X3 399 aaPredicted RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 TP63Q9H3D4 680 aaPredicted RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 ACBD3Q9H3P7 528 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CDC42EP4Q9H3Q1 356 aaKnown RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 LRRC40Q9H9A6 602 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 XAB2Q9HCS7 855 aaKnown RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 EIF2B3Q9NR50 452 aaKnown RBP8.05□□□□□ -1.12
SDF2-204ENST00000587338 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 CHMP2BQ9UQN3 213 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 HRH3Q9Y5N1 445 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 NFS1Q9Y697 457 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 MAD1L1Q9Y6D9 718 aa8.05□□□□□ -1.12
SDF2-204ENST00000587338 A0A1W2PPV9 198 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 OR2W5A6NFC9 320 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 MROH6A6NGR9 719 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 ERI2A8K979 691 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 EIF3HO15372 352 aaKnown RBP eCLIP8.04□□□□□ -1.12
SDF2-204ENST00000587338 P2RX6O15547 441 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 PROM1O43490 865 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 KLK8O60259 260 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 STATHP02808 62 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 MGAT1P26572 445 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 ADSLP30566 484 aaPredicted RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 ELK3P41970 407 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 MAGEA6P43360 314 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 XCR1P46094 333 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 AVPR1BP47901 424 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 SNRPNP63162 240 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 CDK16Q00536 496 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 PMPCAQ10713 525 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 FASTKD3Q14CZ7 662 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 MSS51Q4VC12 460 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 ZNF468Q5VIY5 522 aaPredicted RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 TMEM198Q66K66 360 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 PAPD4Q6PIY7 484 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 AFTPHQ6ULP2 937 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 TRMT10CQ7L0Y3 403 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 LINC00523Q86TU6 105 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 CAND1Q86VP6 1230 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 SHISA5Q8N114 240 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 FBXO36Q8NEA4 188 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 OR5M3Q8NGP4 307 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 OR9A4Q8NGU2 314 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 HMGCLL1Q8TB92 370 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 M1APQ8TC57 530 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 TMEM125Q96AQ2 219 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 PLCD4Q9BRC7 762 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 GPATCH1Q9BRR8 931 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 CDCP1Q9H5V8 836 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 MRPS30Q9NP92 439 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 MMP25Q9NPA2 562 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 NINJ2Q9NZG7 142 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 SAMD15Q9P1V8 674 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 HCN3Q9P1Z3 774 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 TSR3Q9UJK0 312 aaKnown RBP8.04□□□□□ -1.12
SDF2-204ENST00000587338 EDARQ9UNE0 448 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 MXRA5Q9NR99 2828 aa8.04□□□□□ -1.12
SDF2-204ENST00000587338 SDR42E2A6NKP2 422 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
SDF2-204ENST00000587338 AP3B1O00203 1094 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 RIPK2O43353 540 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 HS6ST1O60243 411 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 PRMT3O60678 531 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 PDE9AO76083 593 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 C1orf105O95561 183 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 GOT2P00505 430 aaKnown RBP8.03□□□□□ -1.12
SDF2-204ENST00000587338 CYC1P08574 325 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 MLNP12872 115 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 AOAHP28039 575 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 TPP2P29144 1249 aaPredicted RBP8.03□□□□□ -1.12
SDF2-204ENST00000587338 PHBP35232 272 aa8.03□□□□□ -1.12
SDF2-204ENST00000587338 RPA3P35244 121 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms