RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 GPR87Q9BY21 358 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 ELOVL6Q9H5J4 265 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 GPN2Q9H9Y4 310 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 ZNF304Q9HCX3 659 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 PSD3Q9NYI0 1048 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 ZNF225Q9UK10 706 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 KCND3Q9UK17 655 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 SNX6Q9UNH7 406 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 SSUH2Q9Y2M2 353 aa18.21■□□□□ 0.51
DDX39A-204ENST00000586558 MRPS2Q9Y399 296 aaKnown RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 MDC1Q14676 2089 aaKnown RBP18.21■□□□□ 0.51
DDX39A-204ENST00000586558 SPTBP11277 2137 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 A0A1B0GTL3 188 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 H0YIG0 161 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 FOXS1O43638 330 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 OR4F21O95013 312 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 KRT6AP02538 564 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 KRT6BP04259 564 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 ITGAXP20702 1163 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 KRT6CP48668 564 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 TGM3Q08188 693 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 GALNT1Q10472 559 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-204ENST00000586558 DNASE1L3Q13609 305 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 TOR1AIP1Q5JTV8 583 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 ADNP2Q6IQ32 1131 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 FAM198BQ6UWH4 519 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 CHSY3Q70JA7 882 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 SPACA3Q8IXA5 215 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 ANKRD42Q8N9B4 389 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 SRFBP1Q8NEF9 429 aaKnown RBP18.2■□□□□ 0.5
DDX39A-204ENST00000586558 OR2L5Q8NG80 312 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 ZCCHC10Q8TBK6 192 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 WDR20Q8TBZ3 569 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 UTP15Q8TED0 518 aaKnown RBP18.2■□□□□ 0.5
DDX39A-204ENST00000586558 CENPKQ9BS16 269 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 AKIRIN1Q9H9L7 192 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-204ENST00000586558 CLK4Q9HAZ1 481 aaKnown RBP18.2■□□□□ 0.5
DDX39A-204ENST00000586558 PRM3Q9NNZ6 103 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 MID1IP1Q9NPA3 183 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 DMRT3Q9NQL9 472 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 IFT80Q9P2H3 777 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-204ENST00000586558 CROTQ9UKG9 612 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 PCDHGA6Q9Y5G7 932 aa18.2■□□□□ 0.5
DDX39A-204ENST00000586558 A0A088AWK7 358 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 A0A0A6YYC8 382 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 LOC101059948A0A1B0GTJ6 334 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 I3L1I5 382 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 TAF4O00268 1085 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 TERTO14746 1132 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 FFAR3O14843 346 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 GPR42O15529 346 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 ATP8B1O43520 1251 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 KLHL18O94889 574 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 TBX6O95947 436 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 ALBP02768 609 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 ZNF888P0CJ79 500 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 IL1RNP18510 177 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 TCN2P20062 427 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 ZNF10P21506 573 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 FBLP22087 321 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 PTX3P26022 381 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 HNRNPH1P31943 449 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 DLSTP36957 453 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 UCNP55089 124 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 RPS15P62841 145 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 ZNF33BQ06732 778 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 DDX39BQ13838 428 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 RCN2Q14257 317 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 NCF4Q15080 339 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 ARHGAP40Q5TG30 622 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 BROXQ5VW32 411 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 FAM199XQ6PEV8 388 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 CDYL2Q8N8U2 506 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 OR9A4Q8NGU2 314 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 OR6Y1Q8NGX8 325 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 PPP1R14CQ8TAE6 165 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 METTL6Q8TCB7 284 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 MS4A6EQ96DS6 147 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 MMABQ96EY8 250 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 DCBLD2Q96PD2 775 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 CCNL2Q96S94 520 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 MTERF1Q99551 399 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 REXO4Q9GZR2 422 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 SLC26A1Q9H2B4 701 aa18.19■□□□□ 0.5
DDX39A-204ENST00000586558 EML4Q9HC35 981 aaKnown RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 GPN3Q9UHW5 284 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-204ENST00000586558 UBFD1O14562 309 aaKnown RBP18.18■□□□□ 0.5
DDX39A-204ENST00000586558 ERI3O43414 337 aaKnown RBP18.18■□□□□ 0.5
DDX39A-204ENST00000586558 GALR3O60755 368 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-204ENST00000586558 SERPINE1P05121 402 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 CAPN1P07384 714 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 SMIM10L1P0DMW3 83 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 GRK2P25098 689 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 HMOX2P30519 316 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 OR1D4P47884 311 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 ARFIP1P53367 373 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 DEFB134Q4QY38 66 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 KHDRBS2Q5VWX1 349 aaKnown RBP18.18■□□□□ 0.5
DDX39A-204ENST00000586558 LCN10Q6JVE6 187 aa18.18■□□□□ 0.5
DDX39A-204ENST00000586558 TRIM40Q6P9F5 258 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms