RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 NRARPQ7Z6K4 114 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 KCNMB4Q86W47 210 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 CROCCP3Q8IVE0 287 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 APCDD1Q8J025 514 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 OR9Q2Q8NGE9 314 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 SSC4DQ8WTU2 575 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 NSMAFQ92636 917 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 CASP10Q92851 521 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 P2RX5Q93086 422 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 RMDN2Q96LZ7 410 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 GDAP1L1Q96MZ0 367 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 LINC00167Q96N53 147 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 SLC25A23Q9BV35 468 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 JPT2Q9H910 190 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 NYAP2Q9P242 653 aa2.54□□□□□ -2
SMCHD1-206ENST00000581631 ZNF107Q9UII5 783 aaPredicted RBP2.54□□□□□ -2
SMCHD1-206ENST00000581631 A8MXE2 369 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 E5RGE8 158 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 ZNF749O43361 778 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 GPRIN2O60269 458 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 KIF5CO60282 957 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 TBX10O75333 385 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 RECQL5O94762 991 aaPredicted RBP2.53□□□□□ -2
SMCHD1-206ENST00000581631 PKLRP30613 574 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 KRT20P35900 424 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 KHKP50053 298 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 TAZQ16635 292 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 UPP1Q16831 310 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 LRRC73Q5JTD7 316 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 RPUSD3Q6P087 351 aaKnown RBP2.53□□□□□ -2
SMCHD1-206ENST00000581631 DHRS11Q6UWP2 260 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 CHST3Q7LGC8 479 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 PCGF5Q86SE9 256 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 CATSPER3Q86XQ3 398 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 PHC2Q8IXK0 858 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 SUMF1Q8NBK3 374 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 SLC26A7Q8TE54 656 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 IL12RB2Q99665 862 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 CCDC28BQ9BUN5 200 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 RABEP2Q9H5N1 569 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 C3orf14Q9HBI5 128 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 RAB9BQ9NP90 201 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 IL1RAPQ9NPH3 570 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 NKIRAS2Q9NYR9 191 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 KLK11Q9UBX7 282 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 SLC12A6Q9UHW9 1150 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 NSG2Q9Y328 171 aa2.53□□□□□ -2
SMCHD1-206ENST00000581631 SPATA31D1Q6ZQQ2 1576 aa2.53□□□□□ -2.01
SMCHD1-206ENST00000581631 GON4LQ3T8J9 2241 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 RNF123Q5XPI4 1314 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 IQCMA0A1B0GVH7 501 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 ARHGEF33A8MVX0 844 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 PRSS46E5RG02 174 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 PDHXO00330 501 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 OGTO15294 1046 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 MTRF1O75570 445 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 KRT6AP02538 564 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 KRT6BP04259 564 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 ADORA3P0DMS8 318 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 GIFP27352 417 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 EEF1DP29692 281 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 SSTR1P30872 391 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 KRT6CP48668 564 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 MFAP3P55082 362 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 IL10RBQ08334 325 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 HYAL4Q2M3T9 481 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 ZNF542PQ5EBM4 170 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 TCP11X2Q5H9J9 407 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 SPANXN4Q5MJ08 99 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 KRT74Q7RTS7 529 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 PRUNE1Q86TP1 453 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 CCAR2Q8N163 923 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 PRSS35Q8N3Z0 413 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 LSMEM1Q8N8F7 131 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 RTL3Q8N8U3 475 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 PSMB7Q99436 277 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 IARS2Q9NSE4 1012 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 EXOC1Q9NV70 894 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 PILRAQ9UKJ1 303 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 TSPAN16Q9UKR8 245 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 AGTPBP1Q9UPW5 1226 aa2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 MRPS18CQ9Y3D5 142 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 MYH14Q7Z406 1995 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-206ENST00000581631 RALGAPA1Q6GYQ0 2036 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 NKX6-3A6NJ46 265 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 SRRM4A7MD48 611 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 SIGLEC5O15389 551 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 MT-ND2P03891 347 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 CCDC175P0C221 793 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 SPP1P10451 314 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 EEF2P13639 858 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 PSMA3P25788 255 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 SRPXP78539 464 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 EIF4EBP2Q13542 120 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 ZNF273Q14593 569 aa2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 SIX1Q15475 284 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 MLF2Q15773 248 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-206ENST00000581631 FAM174BQ3ZCQ3 159 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms