RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 OR56A5P0C7T3 313 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 GABRA1P14867 456 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 ZFXP17010 805 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 CYLC1P35663 651 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 MAN2A2P49641 1150 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 GEMP55040 296 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 NR1H2P55055 460 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 MPP1Q00013 466 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 SRSF2Q01130 221 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 TNK1Q13470 666 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 ACKR1Q16570 336 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 WLSQ5T9L3 541 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 SUSD1Q6UWL2 747 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 RGS9BPQ6ZS82 235 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 KIAA0408Q6ZU52 694 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 VN1R4Q7Z5H5 301 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 KIF18BQ86Y91 864 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 FAM109AQ8N4B1 249 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 APCDD1LQ8NCL9 501 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 RNF217Q8TC41 542 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 IGFBPL1Q8WX77 278 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 RERGQ96A58 199 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 SARAFQ96BY9 339 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 LRRC46Q96FV0 321 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 DACH2Q96NX9 599 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 VAT1Q99536 393 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 CCL19Q99731 98 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 WDR83Q9BRX9 315 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 KRTAP9-9Q9BYP9 154 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 KRTAP9-4Q9BYQ2 154 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 GBA3Q9H227 469 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 HSD3B7Q9H2F3 369 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 C10orf88Q9H8K7 445 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 MRPS30Q9NP92 439 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 TIMMDC1Q9NPL8 285 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 JKAMPQ9P055 326 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 PCYOX1Q9UHG3 505 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 ZNF223Q9UK11 482 aaPredicted RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 DRG1Q9Y295 367 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 R3HDM2Q9Y2K5 976 aaKnown RBP7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 ABCA1O95477 2261 aa7.11□□□□□ -1.27
SMARCE1-217ENST00000580654 FREM3P0C091 2139 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 DOCK7Q96N67 2140 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 ATP6AP2A0A1C7CYW4 349 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 SAGE2PA6NJ88 616 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 HMGB1P1B2RPK0 211 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 TXNDC9O14530 226 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 SPRY1O43609 319 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 PRKNO60260 465 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 ATP6AP2O75787 350 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 ERGP11308 486 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 EZRP15311 586 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 PTMSP20962 102 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 PSMA3P25788 255 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 AOAHP28039 575 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 AGFG1P52594 562 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 RELAQ04206 551 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 FOXO1Q12778 655 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 TRIM14Q14142 442 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 SPARCL1Q14515 664 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 NAA25Q14CX7 972 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 NDUFA9Q16795 377 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 HYAL4Q2M3T9 481 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 CCDC38Q502W7 563 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 CT47A1Q5JQC4 288 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 NDUFAF5Q5TEU4 345 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 KIAA0930Q6ICG6 404 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 TMEM214Q6NUQ4 689 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 MFSD7Q6UXD7 560 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 SLC22A16Q86VW1 577 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 KRT222Q8N1A0 295 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 TMEM156Q8N614 296 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 OR5T3Q8NGG3 340 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 ASZ1Q8WWH4 475 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 SYN2Q92777 582 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 PEX11GQ96HA9 241 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 MAK16Q9BXY0 300 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 DEFB126Q9BYW3 111 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 PLA2G12AQ9BZM1 189 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 EPB41L4BQ9H329 900 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 ARNT2Q9HBZ2 717 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 SEMA4BQ9NPR2 832 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 C6orf203Q9P0P8 240 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 ZNF629Q9UEG4 869 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 TTC7AQ9ULT0 858 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 MGAM2Q2M2H8 2515 aa7.1□□□□□ -1.27
SMARCE1-217ENST00000580654 A0A087X0T9 212 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 CCDC162PA2VCL2 907 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 SH3D21A4FU49 640 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ZNF860A6NHJ4 632 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 DEFB108AA8MXU0 73 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 CES2O00748 559 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TPD52L2O43399 206 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 TLX2O43763 284 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 CD5LO43866 347 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 ANXA9O76027 345 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 OR6B1O95007 311 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 EPPINO95925 133 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 KRT1P04264 644 aa7.09□□□□□ -1.27
SMARCE1-217ENST00000580654 FAM228BP0C875 321 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms