RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FHP07954 510 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 ENO2P09104 434 aaPredicted RBP17.02■□□□□ 0.32
CHD3-214ENST00000572579 SLC35G6P0C7Q6 338 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 GRK3P35626 688 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 HNF4AP41235 474 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 ARL4CP56559 192 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 CSHL1Q14406 222 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 USP10Q14694 798 aaKnown RBP17.02■□□□□ 0.32
CHD3-214ENST00000572579 HERC3Q15034 1050 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 PRAMEF9Q5VWM5 478 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 SPINK14Q6IE38 97 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 PAPD4Q6PIY7 484 aaKnown RBP17.02■□□□□ 0.32
CHD3-214ENST00000572579 NXPE4Q6UWF7 544 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 FJX1Q86VR8 437 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 SPATA6LQ8N4H0 392 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 KIF2BQ8N4N8 673 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 GABPB2Q8TAK5 448 aaPredicted RBP17.02■□□□□ 0.32
CHD3-214ENST00000572579 M1APQ8TC57 530 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 RELTQ969Z4 430 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 TBC1D20Q96BZ9 403 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 OR1F2PQ96R84 312 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 UNKQ9C0B0 810 aaKnown RBP17.02■□□□□ 0.32
CHD3-214ENST00000572579 SLC6A16Q9GZN6 736 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 SAR1BQ9Y6B6 198 aa17.02■□□□□ 0.32
CHD3-214ENST00000572579 FAM95CA0A1B0GW59 222 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 B4GALT2O60909 372 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 RASAL1O95294 804 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 TBX6O95947 436 aaPredicted RBP17.01■□□□□ 0.31
CHD3-214ENST00000572579 C1QAP02745 245 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 SERPIND1P05546 499 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 AHRP35869 848 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 AGTR2P50052 363 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 SLC26A5P58743 744 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 RAB8AP61006 207 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 TSNQ15631 228 aaKnown RBP17.01■□□□□ 0.31
CHD3-214ENST00000572579 INAQ16352 499 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 ATL1Q8WXF7 558 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 KRT12Q99456 494 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 TRIM54Q9BYV2 358 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 KCNK13Q9HB14 408 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 C19orf25Q9UFG5 118 aaPredicted RBP17.01■□□□□ 0.31
CHD3-214ENST00000572579 MTO1Q9Y2Z2 717 aaKnown RBP17.01■□□□□ 0.31
CHD3-214ENST00000572579 CLDN16Q9Y5I7 305 aa17.01■□□□□ 0.31
CHD3-214ENST00000572579 IGKV3D-11A0A0A0MRZ8 115 aa17■□□□□ 0.31
CHD3-214ENST00000572579 TAPBPO15533 448 aa17■□□□□ 0.31
CHD3-214ENST00000572579 UNC5CO95185 931 aa17■□□□□ 0.31
CHD3-214ENST00000572579 IL10P22301 178 aa17■□□□□ 0.31
CHD3-214ENST00000572579 GMPRP36959 345 aa17■□□□□ 0.31
CHD3-214ENST00000572579 SLC6A12P48065 614 aa17■□□□□ 0.31
CHD3-214ENST00000572579 OR4D2P58180 307 aa17■□□□□ 0.31
CHD3-214ENST00000572579 ZNF766Q5HY98 468 aa17■□□□□ 0.31
CHD3-214ENST00000572579 GFRALQ6UXV0 394 aa17■□□□□ 0.31
CHD3-214ENST00000572579 SLCO4C1Q6ZQN7 724 aa17■□□□□ 0.31
CHD3-214ENST00000572579 ZNF227Q86WZ6 799 aa17■□□□□ 0.31
CHD3-214ENST00000572579 NFAM1Q8NET5 270 aaPredicted RBP17■□□□□ 0.31
CHD3-214ENST00000572579 ELP5Q8TE02 316 aa17■□□□□ 0.31
CHD3-214ENST00000572579 ANKRD7Q92527 254 aa17■□□□□ 0.31
CHD3-214ENST00000572579 RHBDF1Q96CC6 855 aa17■□□□□ 0.31
CHD3-214ENST00000572579 PDLIM2Q96JY6 352 aa17■□□□□ 0.31
CHD3-214ENST00000572579 ZNF354BQ96LW1 612 aa17■□□□□ 0.31
CHD3-214ENST00000572579 NAPGQ99747 312 aaPredicted RBP17■□□□□ 0.31
CHD3-214ENST00000572579 CAB39LQ9H9S4 337 aa17■□□□□ 0.31
CHD3-214ENST00000572579 PELI2Q9HAT8 420 aa17■□□□□ 0.31
CHD3-214ENST00000572579 NECTIN3Q9NQS3 549 aa17■□□□□ 0.31
CHD3-214ENST00000572579 ZFATQ9P243 1243 aa17■□□□□ 0.31
CHD3-214ENST00000572579 OARD1Q9Y530 152 aa17■□□□□ 0.31
CHD3-214ENST00000572579 LRBAP50851 2863 aa17■□□□□ 0.31
CHD3-214ENST00000572579 SCN2AQ99250 2005 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 EFCAB8A8MWE9 144 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 NEURL1O76050 574 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 PRF1P14222 555 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 MAOAP21397 527 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 SSTR1P30872 391 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 AP2B1P63010 937 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 CDKL1Q00532 357 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 ACTN3Q08043 901 aaPredicted RBP16.99■□□□□ 0.31
CHD3-214ENST00000572579 RUNX2Q13950 521 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 EXT1Q16394 746 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 FBXO48Q5FWF7 155 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 CAPN12Q6ZSI9 719 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 VN1R5Q7Z5H4 357 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 TMPRSS11BQ86T26 416 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 KLHDC8AQ8IYD2 350 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 DNAJB8Q8NHS0 232 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 SCMH1Q96GD3 660 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 RUNDC3BQ96NL0 473 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 RHOJQ9H4E5 214 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 TEKT2Q9UIF3 430 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 CPAMD8Q8IZJ3 1885 aa16.99■□□□□ 0.31
CHD3-214ENST00000572579 CCDC188H7C350 402 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 ZNHIT1O43257 154 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 KCNC1P48547 511 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 RGS1Q08116 209 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 RBBP5Q15291 538 aaKnown RBP16.98■□□□□ 0.31
CHD3-214ENST00000572579 OR1C1Q15619 314 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 ADNP2Q6IQ32 1131 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 ZBED8Q8IZ13 594 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 CA13Q8N1Q1 262 aa16.98■□□□□ 0.31
CHD3-214ENST00000572579 NKAPQ8N5F7 415 aaKnown RBP16.98■□□□□ 0.31
CHD3-214ENST00000572579 VPS39Q96JC1 886 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms