RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PDPRQ8NCN5 879 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 OR5T3Q8NGG3 340 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 RHEBL1Q8TAI7 183 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 KCTD4Q8WVF5 259 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 NXNL1Q96CM4 212 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 MTBPQ96DY7 904 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 THOC3Q96J01 351 aaKnown RBP13.76□□□□□ -0.21
LITAF-208ENST00000571627 VN1R1Q9GZP7 353 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 CLMPQ9H6B4 373 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 DNAJC11Q9NVH1 559 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 NUDT4Q9NZJ9 180 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 ZFP69BQ9UJL9 534 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 ASB1Q9Y576 335 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 SLC22A7Q9Y694 548 aa13.76□□□□□ -0.21
LITAF-208ENST00000571627 RP1L1Q8IWN7 2480 aaPredicted RBP13.76□□□□□ -0.21
LITAF-208ENST00000571627 SETXQ7Z333 2677 aaKnown RBP13.75□□□□□ -0.21
LITAF-208ENST00000571627 NSG1A0A0A6YYJ2 146 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 SUPT3HB4E1H0 165 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 C4orf51C9J302 202 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 DNAJB6O75190 326 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 SUPT3HO75486 399 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 SORBS2O94875 1100 aaKnown RBP13.75□□□□□ -0.21
LITAF-208ENST00000571627 KLHL2O95198 593 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 CELA2AP08217 269 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 C1GALT1C1LP0DN25 315 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 MYBL2P10244 700 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 GNAZP19086 355 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 CXCR2P25025 360 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 AHRP35869 848 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 MAGEA12P43365 314 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 RGS1Q08116 209 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 HYAL2Q12891 473 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 PWP1Q13610 501 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 SLC29A2Q14542 456 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 ADGRD1Q6QNK2 874 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 LANCL3Q6ZV70 420 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.75□□□□□ -0.21
LITAF-208ENST00000571627 GSPT2Q8IYD1 628 aaKnown RBP13.75□□□□□ -0.21
LITAF-208ENST00000571627 CENPLQ8N0S6 344 aaPredicted RBP13.75□□□□□ -0.21
LITAF-208ENST00000571627 SNX31Q8N9S9 440 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 NT5CQ8TCD5 201 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 PEX11GQ96HA9 241 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 VPS50Q96JG6 964 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 LHPPQ9H008 270 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 VPS11Q9H270 941 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 ANKZF1Q9H8Y5 726 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 C5AR2Q9P296 337 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 PTBP2Q9UKA9 531 aaKnown RBP13.75□□□□□ -0.21
LITAF-208ENST00000571627 CPAMD8Q8IZJ3 1885 aa13.75□□□□□ -0.21
LITAF-208ENST00000571627 RELNP78509 3460 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 ASH1LQ9NR48 2969 aaKnown RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 IGHV1-45A0A0A0MS14 117 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 IGHV3-20A0A0C4DH32 117 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 TRIM49D1C9J1S8 452 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 UBXN8O00124 270 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 CCNT2O60583 730 aaKnown RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 GALR3O60755 368 aaPredicted RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 PRAMEF4O60810 478 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 H2AFYO75367 372 aaKnown RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 STK16O75716 305 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 CDC123O75794 336 aaPredicted RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 C8orf89P0DMQ9 161 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 COL6A2P12110 1019 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 ALOX12P18054 663 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 GLRBP48167 497 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 RAB8AP61006 207 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 HERC3Q15034 1050 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 PCOLCEQ15113 449 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 TSNAXIP1Q2TAA8 658 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 TOR1AIP1Q5JTV8 583 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 IRAK1BP1Q5VVH5 260 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 PRAMEF9Q5VWM5 478 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 TIFABQ6ZNK6 161 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 NDUFAF7Q7L592 441 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 HPS6Q86YV9 775 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 AFAP1L2Q8N4X5 818 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 UTP15Q8TED0 518 aaKnown RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 MIB2Q96AX9 1013 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 ATOH8Q96SQ7 321 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 SLC6A16Q9GZN6 736 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 AICDAQ9GZX7 198 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 KLHL31Q9H511 634 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 PPCSQ9HAB8 311 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 CSAG2Q9Y5P2 127 aa13.74□□□□□ -0.21
LITAF-208ENST00000571627 FLNBO75369 2602 aaKnown RBP13.74□□□□□ -0.21
LITAF-208ENST00000571627 LOC102723996A0A087X1L8 192 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 IQANK1A0A1B0GTG1 560 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 A0A1W2PQ72 361 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 RBP1P09455 135 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 PRR35P0CG20 571 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 EPORP19235 508 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 AGTR2P50052 363 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 PDK4Q16654 411 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 PLEKHN1Q494U1 663 aaPredicted RBP13.73□□□□□ -0.21
LITAF-208ENST00000571627 AGAP7PQ5VUJ5 663 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 ADNP2Q6IQ32 1131 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 TMEM205Q6UW68 189 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
LITAF-208ENST00000571627 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms