RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GALR3O60755 368 aaPredicted RBP11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 CDC123O75794 336 aaPredicted RBP11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 DDAH2O95865 285 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 ALOX12P18054 663 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 IL10P22301 178 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 AHRP35869 848 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 SCTRP47872 440 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 HNMTP50135 292 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 TNFSF10P50591 281 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 CDKL1Q00532 357 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 REEP5Q00765 189 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF33BQ06732 778 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 C2orf54Q08AI8 447 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 ABRAXAS2Q15018 415 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 TSNQ15631 228 aaKnown RBP11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 INAQ16352 499 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 BTBD16Q32M84 506 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 DEFB134Q4QY38 66 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 ABHD17BQ5VST6 288 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 PLAG1Q6DJT9 500 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 ANKRD37Q7Z713 158 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 AFAP1L2Q8N4X5 818 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 BCORP1Q8N888 145 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 CATSPER1Q8NEC5 780 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 SPATA4Q8NEY3 305 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 SUN3Q8TAQ9 357 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 FAR1Q8WVX9 515 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 MOCOSQ96EN8 888 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 TSPAN17Q96FV3 270 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 PEX11GQ96HA9 241 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 IMMP1LQ96LU5 166 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 SPNS1Q9H2V7 528 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 PLA2G3Q9NZ20 509 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 PLEKHB1Q9UF11 243 aaPredicted RBP11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 SLC22A14Q9Y267 594 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 SLC5A6Q9Y289 635 aa11.66□□□□□ -0.54
CTDNEP1-205ENST00000570828 ESPL1Q14674 2120 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 HEATR5BQ9P2D3 2071 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 URADA6NGE7 173 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 E2F3O00716 465 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 PIAS1O75925 651 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 WDR47O94967 919 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 F10P00742 488 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 FHP07954 510 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 ZNF888P0CJ79 500 aaPredicted RBP11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 RNF224P0DH78 156 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 EDN3P14138 238 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 JAK1P23458 1154 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 SSTR1P30872 391 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 CASQ1P31415 396 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 POU4F1Q01851 419 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 CBLBQ13191 982 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 RBBP5Q15291 538 aaKnown RBP11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 NSDHLQ15738 373 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 EXT1Q16394 746 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 RPUSD3Q6P087 351 aaKnown RBP11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 NXPE4Q6UWF7 544 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 CEP97Q8IW35 865 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 SHISA5Q8N114 240 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 TRPV3Q8NET8 790 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 OR5T3Q8NGG3 340 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 NT5CQ8TCD5 201 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 ANKRD49Q8WVL7 239 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 HAS2Q92819 552 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 TBC1D20Q96BZ9 403 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 C5orf34Q96MH7 638 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 RNF32Q9H0A6 362 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 OLAHQ9NV23 265 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 UNC79Q9P2D8 2635 aa11.65□□□□□ -0.54
CTDNEP1-205ENST00000570828 CNTRLQ7Z7A1 2325 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 A1L4Q6 167 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 OR5H15A6NDH6 313 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 OR2W5A6NFC9 320 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 NCF1BA6NI72 391 aaPredicted RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 A8MUI8 341 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 NCF1CA8MVU1 366 aaPredicted RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 MAGEB17A8MXT2 336 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 WDPCPO95876 746 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 MYBL2P10244 700 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 NCF1P14598 390 aaPredicted RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 GNAZP19086 355 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 GP5P40197 560 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 HNF4AP41235 474 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 OLR1P78380 273 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 RHAGQ02094 409 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 ACTN3Q08043 901 aaPredicted RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 USP10Q14694 798 aaKnown RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 SFT2D3Q587I9 215 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 PAPD4Q6PIY7 484 aaKnown RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 TSLPQ969D9 159 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 LPAR4Q99677 370 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 CPNE1Q99829 537 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 SLX1AQ9BQ83 275 aa11.64□□□□□ -0.55
CTDNEP1-205ENST00000570828 MCMBPQ9BTE3 642 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms