RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 KLK1P06870 262 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 DCKP27707 260 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 PSMD7P51665 324 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ISL1P61371 349 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 NFATC3Q12968 1075 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 GBX1Q14549 363 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 COX20Q5RI15 118 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 LAIR2Q6ISS4 152 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 TTC29Q8NA56 475 aaPredicted RBP8.43□□□□□ -1.06
LINC00558-201ENST00000569422 OR13F1Q8NGS4 319 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 WDR48Q8TAF3 677 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 ADAMTS16Q8TE57 1224 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 CSF3RQ99062 836 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 SPNS1Q9H2V7 528 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 KRT84Q9NSB2 600 aa8.43□□□□□ -1.06
LINC00558-201ENST00000569422 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 OTOL1A6NHN0 477 aaPredicted RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SCN2BO60939 215 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 PSIP1O75475 530 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 C6orf47O95873 294 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 CYP17A1P05093 508 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 PSMB9P28065 219 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 RAE1P78406 368 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 OCA2Q04671 838 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 C2orf80Q0P641 193 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 CDK5R2Q13319 367 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF77Q15935 545 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 DPY19L1Q2PZI1 675 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF385BQ569K4 471 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 METTL2BQ6P1Q9 378 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 GALNT18Q6P9A2 607 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 MMAAQ8IVH4 418 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 FAM9CQ8IZT9 166 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF540Q8NDQ6 660 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 PIK3C3Q8NEB9 887 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ATL1Q8WXF7 558 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 HDAC2Q92769 488 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 GIMAP5Q96F15 307 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 KCNC2Q96PR1 638 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 FUNDC2Q9BWH2 189 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 REEP1Q9H902 201 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 IL1RAPQ9NPH3 570 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 TBC1D14Q9P2M4 693 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 GULP1Q9UBP9 304 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ITGB1BP2Q9UKP3 347 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ASF1AQ9Y294 204 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 A0A0G2JN53 185 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SCAMP2O15127 329 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SLC16A5O15375 505 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SCGB1D2O95969 90 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 HPRP00739 348 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 VIPP01282 170 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 FGBP02675 491 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SERPIND1P05546 499 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ADH5P11766 374 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 RRM2P31350 389 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 MMP12P39900 470 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 ALDH9A1P49189 494 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 PRIM2P49643 509 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 CDKL4Q5MAI5 379 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 RBM48Q5RL73 367 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 CAPN13Q6MZZ7 669 aaPredicted RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 MED27Q6P2C8 311 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SZRD1Q7Z422 152 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 TECPR1Q7Z6L1 1165 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 C11orf49Q9H6J7 331 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 THUMPD1Q9NXG2 353 aaKnown RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 C5AR2Q9P296 337 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SH3GLB1Q9Y371 365 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 PCDHB11Q9Y5F2 797 aa8.42□□□□□ -1.06
LINC00558-201ENST00000569422 PCYT1BQ9Y5K3 369 aaPredicted RBP8.42□□□□□ -1.06
LINC00558-201ENST00000569422 SLC5A10A0PJK1 596 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 M0R129 80 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 SUV39H1O43463 412 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 POP7O75817 140 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 C1orf105O95561 183 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 HTR1BP28222 390 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TTKP33981 857 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 CLK3P49761 638 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TAS2R50P59544 299 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 HBA1P69905 142 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 PHEXP78562 749 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 FPGSQ05932 587 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 CSTF3Q12996 717 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 ATP1A4Q13733 1029 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 SPCS2Q15005 226 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 NPTX1Q15818 432 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF691Q5VV52 312 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 LAIR1Q6GTX8 287 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 GRHL2Q6ISB3 625 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 COMMD6Q7Z4G1 85 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TBC1D15Q8TC07 691 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 YTHDF1Q9BYJ9 559 aaKnown RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 C12orf49Q9H741 205 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 TM7SF3Q9NS93 570 aa8.41□□□□□ -1.06
LINC00558-201ENST00000569422 SPATA6Q9NWH7 488 aaPredicted RBP8.41□□□□□ -1.06
LINC00558-201ENST00000569422 RHCGQ9UBD6 479 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms