RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 RETSATQ6NUM9 610 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 TMEM179BQ7Z7N9 219 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 DDX53Q86TM3 631 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 C7orf61Q8IZ16 206 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 OR9I1Q8NGQ6 314 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 APH1BQ8WW43 257 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 NR4A3Q92570 626 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 MYLPFQ96A32 169 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 EMID1Q96A84 441 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 PPM1MQ96MI6 270 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ZSWIM3Q96MP5 696 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 TMEM74Q96NL1 305 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 SNRNP25Q9BV90 132 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 MMP28Q9H239 520 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 SPNS1Q9H2V7 528 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 GHITMQ9H3K2 345 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 RNF167Q9H6Y7 350 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 UNKLQ9H9P5 680 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 PCDHB16Q9NRJ7 776 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 NHSL1Q5SYE7 1610 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 A0A0A0MRY4 1105 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 FAM234BA2RU67 622 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 GIMD1P0DJR0 217 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CHAF1BQ13112 559 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 WDR74Q6RFH5 385 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 STRA8Q7Z7C7 330 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 C12orf40Q86WS4 652 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 HIPK1Q86Z02 1210 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 AMER2Q8N7J2 671 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ZCCHC14Q8WYQ9 949 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 SPATA13Q96N96 652 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 DPYSL5Q9BPU6 564 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ACBD6Q9BR61 282 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CHCHD6Q9BRQ6 235 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 SRRQ9GZT4 340 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ENAMQ9NRM1 1142 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 MRPL15Q9P015 296 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 NDRG4Q9ULP0 352 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 KLK4Q9Y5K2 254 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 U3KQV3 271 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ARNTLO00327 626 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 SYN3O14994 580 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 KIAA0513O60268 411 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 HCN1O60741 890 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 USP17L7P0C7H9 530 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 RAB6AP20340 208 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 HTR1EP28566 365 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CTNNB1P35222 781 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ARL4AP40617 200 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 DHODHQ02127 395 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 FAHD1Q6P587 224 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CFAP77Q6ZQR2 320 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 GPRIN3Q6ZVF9 776 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 DET1Q7L5Y6 550 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 TMPRSS9Q7Z410 1059 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 RAB44Q7Z6P3 723 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 SPAG16Q8N0X2 631 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ZNF565Q8N9K5 539 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 GPR156Q8NFN8 814 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 OR8K5Q8NH50 307 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 WDR36Q8NI36 951 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 COQ8BQ96D53 544 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CERS2Q96G23 380 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 NSMCE2Q96MF7 247 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ERAP1Q9NZ08 941 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 KCMF1Q9P0J7 381 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ZNF230Q9UIE0 474 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 SAMHD1Q9Y3Z3 626 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 CHD3Q12873 2000 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 A0A0A6YYJ9 748 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 PNMA8CA0A1B0GUJ8 204 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CIB4A0PJX0 185 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 PQLC2LA1A4F0 135 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 URADA6NGE7 173 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 DDTLA6NHG4 134 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 INMT-MINDY4F8WBC2 141 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 TULP3O75386 442 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CLEC2LP0C7M8 214 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 PRKAR2AP13861 404 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 YWHAQP27348 245 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 PIGAP37287 484 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 STAT5AP42229 794 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 HYAL2Q12891 473 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 CAMK1Q14012 370 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 FBXO43Q4G163 708 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 RNASE12Q5GAN4 147 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 PRR18Q8N4B5 295 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 GDPD1Q8N9F7 314 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ZNF431Q8TF32 576 aaPredicted RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 COPS5Q92905 334 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 MSLNLQ96KJ4 702 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 WFIKKN1Q96NZ8 548 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ACOX2Q99424 681 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 PARK7Q99497 189 aaKnown RBP2.82□□□□□ -1.96
CHD9-218ENST00000566029 ELOVL4Q9GZR5 314 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 AKTIPQ9H8T0 292 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 ACTR8Q9H981 624 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 RGS18Q9NS28 235 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 FAM49BQ9NUQ9 324 aa2.82□□□□□ -1.96
CHD9-218ENST00000566029 THUMPD1Q9NXG2 353 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms